Pairwise Alignments

Query, 230 a.a., ribosomal small subunit pseudouridine synthase A from Pseudomonas putida KT2440

Subject, 234 a.a., pseudouridine synthase family protein from Dechlorosoma suillum PS

 Score =  122 bits (305), Expect = 8e-33
 Identities = 78/230 (33%), Positives = 125/230 (54%), Gaps = 5/230 (2%)

Query: 1   MRLDRFLANLPSYNRQNVRLMLAQRRVRVDGQVVSDPLTDVR-EFSRVELDEQLLQAGRP 59
           M+L++ L +     R+  R ++    + + G VV DP  +V  E     +D+Q  +  R 
Sbjct: 1   MQLEKLLHSQGFGTRKECRALVRNGWLEIGGVVVEDPFLEVDPEGFEFTVDDQPWRY-RE 59

Query: 60  ARYLMLYKPTGCVSATHDPQH-RTVLDLLPAALRD-DLHIAGRLDFNTTGLMILTNDGQW 117
             YLM++KP G    +H P+H R++  LLP  L + D+   GRLD +TTGL+++T+DGQ+
Sbjct: 60  KAYLMIHKP-GDYECSHKPKHHRSIFTLLPEELVNRDVQCVGRLDEDTTGLLLMTDDGQF 118

Query: 118 SRRLTQPATKLPKHYLVDTEDEIGEHYVAKFREGFYFAFEDLTTQPAQLDILGPHRARLA 177
             +++ P  K+PK Y +  +  I +  + +   G     E         +++     RL 
Sbjct: 119 IHQMSSPKRKVPKVYEITAKHSIDQAQIDQLLAGVLLHGEYEPVVADSCELVSDTVLRLT 178

Query: 178 IVEGRYHQVKRMFGHFNNKVIGLHRESMGAIRLDPGLAPGEYRELTANEI 227
           I +G+YHQVKRM G   N+V GL R  +GA+ L   LAPGE+R L A ++
Sbjct: 179 ITQGKYHQVKRMLGAVGNRVEGLKRVRIGALDLPADLAPGEWRWLEAEDL 228