Pairwise Alignments

Query, 230 a.a., ribosomal small subunit pseudouridine synthase A from Pseudomonas putida KT2440

Subject, 236 a.a., pseudouridine synthase from Burkholderia phytofirmans PsJN

 Score =  108 bits (270), Expect = 9e-29
 Identities = 73/237 (30%), Positives = 114/237 (48%), Gaps = 11/237 (4%)

Query: 1   MRLDRFLANLPSYNRQNVRLMLAQRRVRVDGQVVSD-----PLTDVREFSRVELDEQLLQ 55
           M L+  L      +R+  R ++A  RV + G   +D     P  D   F  V+  +    
Sbjct: 1   MNLESILFTQGFGSRRQCRALIADARVSIGGVACTDADADFPTGDTAFFFSVDGVDWPY- 59

Query: 56  AGRPARYLMLYKPTGCVSATHDPQHR-TVLDLLPAALRD-DLHIAGRLDFNTTGLMILTN 113
             R   YL+L KP G    + DPQH  +V  LLP    +  +   GRLD +TTGL++L++
Sbjct: 60  --REHAYLLLNKPAG-YECSRDPQHHLSVFSLLPPQFAERGVQCVGRLDQDTTGLLLLSD 116

Query: 114 DGQWSRRLTQPATKLPKHYLVDTEDEIGEHYVAKFREGFYFAFEDLTTQPAQLDILGPHR 173
           DG++    T P  K+PK Y+  T   + +  ++  R+G     E            G + 
Sbjct: 117 DGKFVHLFTSPKRKVPKVYIATTRHPLDDAQLSALRDGVLLHGEPKPIAAVDAAARGANT 176

Query: 174 ARLAIVEGRYHQVKRMFGHFNNKVIGLHRESMGAIRLDPGLAPGEYRELTANEIATV 230
             L ++EG+YHQVKRM     N+   LHRE +G + L   LAPG ++ L   ++ ++
Sbjct: 177 LALTVMEGKYHQVKRMIAAAGNRCEALHRERIGGLALPETLAPGAWQWLDETDLGSL 233