Pairwise Alignments

Query, 302 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 313 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

 Score =  186 bits (473), Expect = 5e-52
 Identities = 106/301 (35%), Positives = 165/301 (54%), Gaps = 3/301 (0%)

Query: 1   MDRLNAMRVFVTVIDLGSQSAAADYLQLSRPVVSRYLAELEDWVGTRLMQRTTRKLSLTA 60
           ++ L  + +F  V   GS SAAA  L +S+  VS  +A+LE  +G +L+QRTTR LSLT 
Sbjct: 2   LELLEPIAIFTHVARAGSFSAAARKLGISKSKVSTQVADLEHKLGVQLIQRTTRSLSLTE 61

Query: 61  AGQETLPRCRQLLELAGDLQAAVQQPEDAPRGALRISVSTSFGQAQLVDAVAAYVRRFPD 120
           AG     +  +LL  A    A+V    DA RG L++ +S SFG   ++ A+  ++ R P+
Sbjct: 62  AGHLLYVQGEELLRDADQAVASVHNLNDATRGVLKVGISQSFGTMHIIPALPEFMARHPE 121

Query: 121 VKVELQMLDRTVNLVDERIDLAIRTSNDVDPSLIARRLSVCRSVVCAAPAYLNERGTPQR 180
           +++++ +LD  V++V E +DL +  S  +   ++AR L  C+ ++ A+P Y+   G P R
Sbjct: 122 LELQVSLLDHKVDVVSEGLDLLLTMSEQLPLGMVARPLMKCQFLLVASPEYIARHGEPSR 181

Query: 181 VEELSLHNCLTH--AYFGHSLWHFAVAGQQVAVPVSGNISANEVMTLQRAALAGAGITML 238
            E+L  HNCL +   +  HS+W F        + VSGN   +    L+ AA++G G+  L
Sbjct: 182 PEQLVDHNCLVYHGEWHEHSVWQFKRGDDYCEIGVSGNFRVDNAPALKSAAVSGLGVVYL 241

Query: 239 PTYQAADAIRRGELVRLLPEAK-PRELNLNAVYTSRKHMPATLRSMLDFLVQRFKDEPAW 297
            +Y   D I +G LV LL + +    L L AVY  RKH+   + S +DF+       P W
Sbjct: 242 ASYLMEDEINKGTLVPLLRDWQLTHHLPLQAVYPRRKHLAPKVSSFIDFIKNHIGTPPYW 301

Query: 298 D 298
           D
Sbjct: 302 D 302