Pairwise Alignments

Query, 302 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 307 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  270 bits (689), Expect = 4e-77
 Identities = 143/303 (47%), Positives = 190/303 (62%), Gaps = 12/303 (3%)

Query: 1   MDRLNAMRVFVTVIDLGSQSAAADYLQLSRPVVSRYLAELEDWVGTRLMQRTTRKLSLTA 60
           MDRL A +VFVT+++ GS   AA+ L +SR +V+RYL+E+E+W G RL+ R+TR+LSLT+
Sbjct: 1   MDRLEAAKVFVTIVERGSMIGAAEVLDMSRSMVTRYLSEMEEWSGARLLHRSTRRLSLTS 60

Query: 61  AGQETLPRCRQLLELAGDLQAAVQQPEDAPRGALRISVSTSFGQAQLVDAVAAYVRRFPD 120
           AG++ L  C++LLELA ++ A        PRG LRIS S       L   V  Y+ ++P 
Sbjct: 61  AGEQVLDYCQRLLELAQEVPAVSHAQSAQPRGLLRISCSQFMAHLILPTVVRPYLAQYPQ 120

Query: 121 VKVELQMLDRTVNLVDERIDLAIRTSNDVDPSLIARRLSVCRSVVCAAPAYLNERGTPQR 180
             V   +  +TV+LV ERID+AIR +N++DPSLIARRL  C SVVCAAP YL       +
Sbjct: 121 ASVNFHVSSQTVDLVAERIDMAIRITNELDPSLIARRLGECESVVCAAPRYLASHSPIIQ 180

Query: 181 VEELSLHNCLTHAYFGHSLWHFA------------VAGQQVAVPVSGNISANEVMTLQRA 228
            E+L+ HNCLT++YFG  +W F              AGQQ  +PV GN+SAN+ M +  A
Sbjct: 181 PEDLTRHNCLTYSYFGDVMWRFTQINHLVTHPDGKSAGQQFNIPVKGNLSANDSMVVLNA 240

Query: 229 ALAGAGITMLPTYQAADAIRRGELVRLLPEAKPRELNLNAVYTSRKHMPATLRSMLDFLV 288
            LAG GI M P +     +  GELV LL + KP+ L +  VY SRKHM  TLR M+D LV
Sbjct: 241 TLAGEGIAMQPVWAVKSYLNSGELVPLLRDFKPQSLGVYGVYQSRKHMQPTLRVMMDMLV 300

Query: 289 QRF 291
             F
Sbjct: 301 AYF 303