Pairwise Alignments

Query, 302 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 312 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  184 bits (467), Expect = 2e-51
 Identities = 103/301 (34%), Positives = 168/301 (55%), Gaps = 3/301 (0%)

Query: 1   MDRLNAMRVFVTVIDLGSQSAAADYLQLSRPVVSRYLAELEDWVGTRLMQRTTRKLSLTA 60
           ++ L  + +F  V   GS SAAA  L +S+  VS  +A+LE  +G +L+QRTTR LSLT 
Sbjct: 2   LELLEPIAIFTHVARAGSFSAAARRLGISKSKVSTQVADLEHRLGVQLIQRTTRSLSLTE 61

Query: 61  AGQETLPRCRQLLELAGDLQAAVQQPEDAPRGALRISVSTSFGQAQLVDAVAAYVRRFPD 120
           AG     +  +LL  A    A+V    DA RG L++ +S SFG   ++ A+ +++ + P+
Sbjct: 62  AGHLLYLQGEELLRDAEQAIASVHNLNDATRGVLKVGISQSFGAMHIIPALPSFMAKHPE 121

Query: 121 VKVELQMLDRTVNLVDERIDLAIRTSNDVDPSLIARRLSVCRSVVCAAPAYLNERGTPQR 180
           +++++ +LD  V++V E +DL +  S  +   ++AR L  C+ ++ A+P Y+ + G P R
Sbjct: 122 LELQVSLLDHKVDVVSEGLDLLLTMSEQLPLGMVARPLMKCQFLLVASPDYIAKHGEPSR 181

Query: 181 VEELSLHNCLTH--AYFGHSLWHFAVAGQQVAVPVSGNISANEVMTLQRAALAGAGITML 238
            E+L  HNCL +   +  HS+W F        + VSGN   +    L+ AA++G G+  L
Sbjct: 182 PEQLVDHNCLVYQGEWHEHSMWQFKKGDDYCEIGVSGNFRVDNAPALKSAAISGLGVVYL 241

Query: 239 PTYQAADAIRRGELVRLLPEAK-PRELNLNAVYTSRKHMPATLRSMLDFLVQRFKDEPAW 297
            +Y   D I +G LV LL + +    L L AVY  RKH+   + + ++F+     + P W
Sbjct: 242 ASYLMEDEIAKGTLVPLLKDWQLTHHLPLQAVYPRRKHLAPKVSAFIEFIKDHIGNPPYW 301

Query: 298 D 298
           D
Sbjct: 302 D 302