Pairwise Alignments

Query, 384 a.a., Probable efflux pump periplasmic linker TtgA from Pseudomonas putida KT2440

Subject, 407 a.a., multidrug efflux system protein from Sinorhizobium meliloti 1021

 Score =  321 bits (823), Expect = 2e-92
 Identities = 185/390 (47%), Positives = 252/390 (64%), Gaps = 21/390 (5%)

Query: 10  LVSAVALATLLSGCKKEE---AAPAAQAPQ-VGVVTIQPQAFTLTSELPGRTSAYRVAEV 65
           L +A+A    L+GC+K E   AA AA  P  V V T + +   +T+ELPGR +A R+AEV
Sbjct: 12  LAAALASVIFLAGCQKNEEQQAAAAAPPPSPVAVFTTKAEPLPITNELPGRITATRIAEV 71

Query: 66  RPQVNGIILKRLFKEGSEVKEGQQLYQIDPAVY-------EATLANAKANLLATRSLAER 118
           RP+++GI+++R+F++G+ VKEG  LY+IDPA +       EATL  A+A +   +  A+R
Sbjct: 72  RPRISGIVVERVFEQGTMVKEGDVLYRIDPAPFQVKVDSAEATLKRAQAVVDQAKRTADR 131

Query: 119 YKQLIDEQAVSKQEYDDANAKRLQAEAS-------LKSAQIDLRYTKVLAPISGRIGRSS 171
             +L + Q  + Q+YDDA A   QAEA        L  A+++L+YT V APISGRIGR+ 
Sbjct: 132 QSRLKEAQVTAVQQYDDAIAALAQAEADVGIAEAGLAEAKLNLQYTNVTAPISGRIGRAL 191

Query: 172 FTEGALVSNGQTDAMATIQQLDPIYVDVTQSTAELLKLRRDLESGQLQKAGDNAASVQLV 231
            TEGALV+      +ATIQQLDPIY D TQS  +L++LR+ L+ GQ   A  N A VQL+
Sbjct: 192 ITEGALVNTNDPQNLATIQQLDPIYADFTQSATDLIRLRKALKDGQWMSA-KNEAEVQLI 250

Query: 232 LEDGSLFKQEGRLEFSEVAVDETTGSVTLRALFPNPDHTLLPGMFVHARLKAGVNANAIL 291
           L+DG+ +  +GRL FSE AVD TTG VTLR  FPNP++ LLPGM+V  +++ G+  +AI 
Sbjct: 251 LDDGTPYALKGRLLFSEAAVDATTGQVTLRGEFPNPNNDLLPGMYVRVQIQQGLEKDAIT 310

Query: 292 APQQGVTRDLKGAPTALVVNQENKVELRQLKASRTLGSDWLIEEGLNPGDRLITEGLQYV 351
            PQQ V R+  G     VVN +NKVE R +   RT+G  W +  GL PG+++I EG Q V
Sbjct: 311 VPQQAVQRNNAGQSQVYVVNADNKVEFRNVTLGRTVGERWQVTSGLKPGEKVIVEGFQKV 370

Query: 352 RPGVEVKVSDATNVKKPAGPDQANAAKADA 381
            PG  V+ SD     KPA P+QA+A+ ADA
Sbjct: 371 GPGAPVQPSDWDPNAKPA-PEQASAS-ADA 398