Pairwise Alignments

Query, 384 a.a., Probable efflux pump periplasmic linker TtgA from Pseudomonas putida KT2440

Subject, 386 a.a., RND family efflux transporter, MFP subunit from Dechlorosoma suillum PS

 Score =  224 bits (571), Expect = 3e-63
 Identities = 135/363 (37%), Positives = 203/363 (55%), Gaps = 19/363 (5%)

Query: 10  LVSAVALATLLSGCKKEEAAPAAQAPQVGVVTIQPQAFTLTSELPGRTSAYRVAEVRPQV 69
           LVS  AL   L+ C   E       P V  + ++ +   L  ELPGR SA R AE+RPQV
Sbjct: 12  LVSLFALT--LAACGGGEPPQEMPPPIVSTIVVETRPVHLEDELPGRVSALRTAEIRPQV 69

Query: 70  NGIILKRLFKEGSEVKEGQQLYQIDPAVYEA-------TLANAKANLLATRSLAERYKQL 122
            GI+L+RLF++G+EV+ GQ L+QI+PA ++A        L  A A +   +   +R K L
Sbjct: 70  GGIVLRRLFEQGAEVQAGQPLFQINPAPFKAEVDSAASALKRAVAAMERAKLQVDRLKPL 129

Query: 123 IDEQAVSKQEYDDA-------NAKRLQAEASLKSAQIDLRYTKVLAPISGRIGRSSFTEG 175
           ++  AVS+Q +DDA       +A   QA+A+L   Q+DL +  + +PI+GRIG    TEG
Sbjct: 130 VNADAVSQQLFDDALSQYNQSSADVAQAKAALARRQLDLDFATIRSPIAGRIGEELVTEG 189

Query: 176 ALVSNGQTDAMATIQQLDPIYVDVTQSTAELLKLRRDLESGQLQKA-GDNAASVQLVLED 234
           ALV     + MA +QQ+D +YVDV Q  + L  +R+   +GQ   + G    +V+++   
Sbjct: 190 ALVGQSDANPMARVQQIDQVYVDVRQPASMLEAIRKS--AGQSASSDGGKDGNVKILDAQ 247

Query: 235 GSLFKQEGRLEFSEVAVDETTGSVTLRALFPNPDHTLLPGMFVHARLKAGVNANAILAPQ 294
           G+ +   G + FS + VD  TG V +R    NP+  LLPGMFV AR+  G +   +L PQ
Sbjct: 248 GNPYPVSGHILFSGINVDAGTGDVVIRIRVNNPERHLLPGMFVRARVPQGGDIQGLLVPQ 307

Query: 295 QGVTRDLKGAPTALVVNQENKVELRQLKASRTLGSDWLIEEGLNPGDRLITEGLQYVRPG 354
           Q V+R   G     VV Q+ K  ++ ++  + +   +L+  GL  G+R+I EG   ++PG
Sbjct: 308 QVVSRSSTGQARVWVVGQDGKAGVKNVELGKLVERQYLVRSGLAAGERVIVEGQDRLQPG 367

Query: 355 VEV 357
           + V
Sbjct: 368 MPV 370