Pairwise Alignments

Query, 384 a.a., Probable efflux pump periplasmic linker TtgA from Pseudomonas putida KT2440

Subject, 379 a.a., MexX family efflux pump subunit from Klebsiella michiganensis M5al

 Score =  360 bits (923), Expect = e-104
 Identities = 194/372 (52%), Positives = 257/372 (69%), Gaps = 20/372 (5%)

Query: 7   VTALVSAVALATLLSGCKKE-EAAPAAQAPQVGVVTIQPQAFTLTSELPGRTSAYRVAEV 65
           VT L S +  A LLSGC    +  P AQ PQV V  +     ++T+ELPGRTSAYRVAEV
Sbjct: 7   VTLLSSLIISAILLSGCDNSGDGQPHAQIPQVSVYVVHSAPLSVTTELPGRTSAYRVAEV 66

Query: 66  RPQVNGIILKRLFKEGSEVKEGQQLYQIDPAVYEATL-------ANAKANLLATRSLAER 118
           RPQVNGIIL+R F EGS+V  GQ LYQIDPA Y+A         A A+A         +R
Sbjct: 67  RPQVNGIILQRNFVEGSDVSAGQSLYQIDPATYQAAYNSTKGDEAKAEAAAAIAHLTVKR 126

Query: 119 YKQLIDEQAVSKQEYDDANAKRLQAEA-------SLKSAQIDLRYTKVLAPISGRIGRSS 171
           Y  L+  + +S+QEYD A A   QA+A       +++SA+I+L YTKV +PISGRIG+SS
Sbjct: 127 YAPLLGTKYISQQEYDQAVATARQADADVIAAKAAVESARINLAYTKVTSPISGRIGKSS 186

Query: 172 FTEGALVSNGQTDAMATIQQLDPIYVDVTQSTAELLKLRRDLESGQLQKAGDNAASVQLV 231
            TEGALV+NGQ DAMAT+QQLDPIYVDVT+S+ + ++L+++     LQ  G++  +VQL+
Sbjct: 187 VTEGALVTNGQADAMATVQQLDPIYVDVTESSNDFMRLKQE----SLQH-GNDTKNVQLI 241

Query: 232 LEDGSLFKQEGRLEFSEVAVDETTGSVTLRALFPNPDHTLLPGMFVHARLKAGVNANAIL 291
           +E+G  +  +G L+FS+V VDE+TGS+TLRA+FPNP H LLPGMFV AR+  GV+ NAIL
Sbjct: 242 MENGQPYTLQGALQFSDVTVDESTGSITLRAIFPNPQHALLPGMFVRARIDEGVSPNAIL 301

Query: 292 APQQGVTRDLKGAPTALVVNQENKVELRQLKASRTLGSDWLIEEGLNPGDRLITEGLQYV 351
            PQQGVTR  +G  + ++VN +N+VE R + A++ +G  WL+  GL  G+++I  GLQ V
Sbjct: 302 VPQQGVTRTPRGEASVMLVNDKNQVETRAVTAAQAIGDKWLVTSGLKAGEKVIVSGLQKV 361

Query: 352 RPGVEVKVSDAT 363
           RPGV VK  + T
Sbjct: 362 RPGVTVKAEEDT 373