Pairwise Alignments

Query, 384 a.a., Probable efflux pump periplasmic linker TtgA from Pseudomonas putida KT2440

Subject, 397 a.a., MexE family multidrug efflux RND transporter periplasmic adaptor subunit from Klebsiella michiganensis M5al

 Score =  380 bits (975), Expect = e-110
 Identities = 203/388 (52%), Positives = 281/388 (72%), Gaps = 18/388 (4%)

Query: 9   ALVSAVALATLLSGCKKEEAAPAAQA-PQVGVVTIQPQAFTLTSELPGRTSAYRVAEVRP 67
           A+V  ++ +  L+GC  + A   AQ  P+VG+VT++     +T+ELPGRTSAYRVAEVRP
Sbjct: 11  AVVLMLSGSLALTGCDDKPAQQGAQQMPEVGIVTLKSAPLQITTELPGRTSAYRVAEVRP 70

Query: 68  QVNGIILKRLFKEGSEVKEGQQLYQIDPAVYEATLANAKANLLATRSLA-------ERYK 120
           QV+GIILKR F EGS+++ G  LYQIDPA Y+AT  +AK +L   ++ A       +RY+
Sbjct: 71  QVSGIILKRNFTEGSDIQAGVSLYQIDPATYQATYESAKGDLAKAQAAANMDQLTVKRYQ 130

Query: 121 QLIDEQAVSKQEYDDA-------NAKRLQAEASLKSAQIDLRYTKVLAPISGRIGRSSFT 173
           +L+  + +S+Q+YD A       NA  + A+A++++A+I+L YTKV +PISGRIG+S+ T
Sbjct: 131 KLLGTKYISQQDYDTAVATAQQSNAAVVAAKAAVETARINLAYTKVTSPISGRIGKSAVT 190

Query: 174 EGALVSNGQTDAMATIQQLDPIYVDVTQSTAELLKLRRDLESGQLQKAGDNAASVQLVLE 233
           EGALV NGQT A+AT+QQLDPIYVDVTQS+ + L+L+++L +G+LQ+  +  A V+LV  
Sbjct: 191 EGALVQNGQTTALATVQQLDPIYVDVTQSSNDFLRLKQELANGKLQQE-NGKAKVELVTN 249

Query: 234 DGSLFKQEGRLEFSEVAVDETTGSVTLRALFPNPDHTLLPGMFVHARLKAGVNANAILAP 293
           DG  + Q G LEFS+V VD+TTGS+TLRA+FPNPDHTLLPGMFV ARL+ GVN +A+L P
Sbjct: 250 DGLKYPQNGTLEFSDVTVDQTTGSITLRAIFPNPDHTLLPGMFVRARLEEGVNPDALLVP 309

Query: 294 QQGVTRDLKGAPTALVVNQENKVELRQLKASRTLGSDWLIEEGLNPGDRLITEGLQYVRP 353
           QQGVTR  +G  +A+VV + +KVE+RQ+ A++ +G  WL+ EGL  GDR+I  GLQ VRP
Sbjct: 310 QQGVTRTPRGDASAMVVGEGDKVEVRQITATQAIGDKWLVTEGLKTGDRVIITGLQKVRP 369

Query: 354 GVEVKVSDATNVKK--PAGPDQANAAKA 379
           GV+VK  +  +  K   AG  Q+   K+
Sbjct: 370 GVQVKAQEVVSDDKQQAAGNAQSEQPKS 397