Pairwise Alignments

Query, 1050 a.a., Probable efflux pump membrane transporter TtgB from Pseudomonas putida KT2440

Subject, 1048 a.a., multidrug-efflux system transmembrane protein from Sinorhizobium meliloti 1021

 Score = 1077 bits (2784), Expect = 0.0
 Identities = 544/1038 (52%), Positives = 734/1038 (70%), Gaps = 5/1038 (0%)

Query: 1    MSKFFIDRPIFAWVIALVIMLVGALSILKLPINQYPSIAPPAIAIAVTYPGASAQTVQDT 60
            M  FFIDRPIFAWV+A+ IM+ G ++I  LP++QYP +APP I+I   YPGAS+Q    +
Sbjct: 1    MPSFFIDRPIFAWVVAIFIMIAGIIAIPLLPVSQYPDVAPPQISINTNYPGASSQDTYQS 60

Query: 61   VVQVIEQQLNGIDNLRYVSSESNSDGSMTITATFEQGTNPDTAQVQVQNKLNLATPLLPQ 120
            V ++IE +LNG++ L Y  S ++S GS++I ATF+ GT+P  A V +QN++    P LP 
Sbjct: 61   VTRLIEDELNGVEGLLYFESSTSSSGSVSIDATFQPGTDPSQASVDIQNRVQRVEPRLPD 120

Query: 121  EVQQQGIRVTKAVKNFLLVIGLVSEDGSMTKDDLANYIVSNMQDPISRTAGVGDFQVFGA 180
             V+QQG++V +A   FLL+I L S DGSM    L +Y+  N+   I R  GVG  Q+F  
Sbjct: 121  PVRQQGVQVDEAGAGFLLIISLTSTDGSMDAIGLGDYLSRNVLSEIQRVPGVGRAQLFAT 180

Query: 181  QYAMRIWLDPAKLNKFQLTPVDVKTAVAAQNVQVSSGQLGGLPALPGTQLNATIIGKTRL 240
            + +MR+WLDP K+    LT  DV  A+ AQN Q++SG +G  P     Q+ A ++ K +L
Sbjct: 181  ERSMRVWLDPDKMLGLNLTAADVTAAIQAQNAQIASGSIGAQPNPITQQVTAPVVIKGQL 240

Query: 241  QTAEQFESILLKVNKDGSQVRLGDVAQVGLGGENYAVSAQFNGKPASGLAVKLATGANAL 300
             + E+F +I+L+ N DGS VRL DVA++ +GGE+Y  S + NG P++ +AV+L+   NA+
Sbjct: 241  SSPEEFGAIVLRANADGSAVRLRDVARLEIGGESYTFSTRLNGSPSAAIAVQLSPSGNAM 300

Query: 301  DTAKALRETIKGLEPFFPPGVKAVFPYDTTPVVTESISGVIHTLIEAVVLVFLVMYLFLQ 360
             T+ A++  +  L  FFP G++   PYDT+P V  SI  V+HTL+EAV LVFLVM+LFLQ
Sbjct: 301  STSAAIKARMDELAEFFPEGLEYSIPYDTSPFVAVSIEKVLHTLVEAVGLVFLVMFLFLQ 360

Query: 361  NFRATIITTMTVPVVLLGTFGILAAAGFSINTLTMFAMVLAIGLLVDDAIVVVENVERVM 420
            N R TII T+ VPV LLGT  ++ A GFSIN LTMF MVLAIG+LVDDAI+VVENVER+M
Sbjct: 361  NVRYTIIPTIVVPVALLGTCAVMLAMGFSINVLTMFGMVLAIGILVDDAIIVVENVERIM 420

Query: 421  SEEGLPPKEATKRSMEQIQGALVGIALVLSAVLLPMAFFGGSTGVIYRQFSITIVSAMGL 480
            SEEGL PK+AT+++M+QI GA++GI LVL++V +PMAFF G+ GVIYRQFS+T+V ++  
Sbjct: 421  SEEGLTPKDATRKAMKQITGAVIGITLVLASVFIPMAFFPGAVGVIYRQFSLTMVVSILF 480

Query: 481  SVLVALIFTPALCATMLKPLKKGEHHTAKGGFFGWFNRNFDRSVNGYERSVGAILRNKVP 540
            S L+AL  TPALCA+ LK + KG HH AK GFFGWFNR FDR+ +GY R+VG I+R    
Sbjct: 481  SALLALSLTPALCASFLKQVPKGHHH-AKRGFFGWFNRGFDRTSHGYTRAVGGIVRRTGR 539

Query: 541  FLLAYALIVVGMIWLFARIPTAFLPEEDQGVLFAQVQTPAGSSAERTQVVVDQMREYLLK 600
            F++ Y  ++ G+ W F ++P++FLP+EDQG +   +Q P+ ++A RT  V++Q      +
Sbjct: 540  FMVIYLALLAGLGWAFLQLPSSFLPDEDQGFVIVMMQLPSEATANRTTEVIEQTETIFGQ 599

Query: 601  DEADTVSSVFTVNGFNFAGRGQSSGMAFIMLKPWDERSKENSVFALAQRAQQHFFTFRDA 660
            ++A  V ++  +NGF+F G GQ++G+AF+ LK W ER  +NS  ++A RA       +DA
Sbjct: 600  EKA--VDTIVAINGFSFFGSGQNAGLAFVTLKDWSERDADNSAQSIAGRATMAMSQIKDA 657

Query: 661  MVFAFAPPAVLELGNATGFDVFLQDRGGVGHEKLMEARNQFLAKAAQSKILSAVRPNGLN 720
            + FA +PPA+  LG   GF   LQDR G+G   L EAR+Q L  A+QSK+L+ VR  G+ 
Sbjct: 658  ISFALSPPAIQGLGTTGGFSFRLQDRAGLGQAALAEARDQLLDLASQSKVLTGVRFEGMP 717

Query: 721  DEPQYQLTIDDERASALGVTIADINNTLSIALGASYVNDFIDRGRVKKVYIQGEPSARMS 780
            D  Q  + ID E+A+  GVT ADIN+T+S  LG+SYVNDF + GR+++V +Q + + RM 
Sbjct: 718  DAAQVSVNIDREKANTFGVTFADINSTISTNLGSSYVNDFPNAGRMQRVTVQADETKRMQ 777

Query: 781  PEDLQKWYVRNGAGEMVPFSSFAKGEWTYGSPKLSRYNGVEAMEILGAPAPGYSTGEAMA 840
              DL    VRN  G MVP S+FA  EW     +   YNG  A+ I G  APGYS+G+A+A
Sbjct: 778  TADLLNLNVRNSNGGMVPLSAFADVEWVKAPTQTVGYNGYPAVRISGEAAPGYSSGDAIA 837

Query: 841  EVERIAGELPSGIGFSWTGMSYEEKLSGSQMPALFALSVLFVFLCLAALYESWSIPIAVV 900
            E+ER+  ELP+G G+ WTG S +E  SGSQ P L ALS L VFLCLAALYESWSIP++V+
Sbjct: 838  EMERLVAELPAGFGYEWTGQSLQEIQSGSQAPLLIALSCLLVFLCLAALYESWSIPVSVI 897

Query: 901  LVVPLGIIGALIATSLRGLSNDVYFLVGLLTTIGLAAKNAILIVEFAKELHEQGRSLYDA 960
            +VVPLG+IGA++A ++R + NDVYF VGL+  IGL+AKNAILI+EFAKEL EQG+SL D+
Sbjct: 898  MVVPLGVIGAVLAVTMRDMPNDVYFKVGLIAIIGLSAKNAILIIEFAKELREQGKSLIDS 957

Query: 961  AIEACRMRLRPIIMTSLAFILGVVPLTIASGAGAGSQHAIGTGVIGGMISATVLAIFWVP 1020
             +EA  +R RPI+MTSLAF LGV+PL IA+GA +GSQ AIGTGV+GGMISATVLAIF+VP
Sbjct: 958  TLEAAHLRFRPILMTSLAFTLGVLPLAIATGASSGSQRAIGTGVMGGMISATVLAIFFVP 1017

Query: 1021 LFFVAVSSLF--GSKEPE 1036
            +FFV V  +F  G   PE
Sbjct: 1018 VFFVFVMKIFERGRAAPE 1035