Pairwise Alignments

Query, 1050 a.a., Probable efflux pump membrane transporter TtgB from Pseudomonas putida KT2440

Subject, 1046 a.a., hydrophobe/amphiphile efflux-1 (HAE1) family transporter from Dechlorosoma suillum PS

 Score =  971 bits (2509), Expect = 0.0
 Identities = 515/1027 (50%), Positives = 706/1027 (68%), Gaps = 7/1027 (0%)

Query: 4    FFIDRPIFAWVIALVIMLVGALSILKLPINQYPSIAPPAIAIAVTYPGASAQTVQDTVVQ 63
            FF+ RPIFAWVIAL I+L+G ++I +LPI +YP++APP ++I   YPGA+ QT+ D VV 
Sbjct: 6    FFVRRPIFAWVIALFIILLGLIAIPQLPIARYPTVAPPMVSIYAVYPGATPQTMNDAVVG 65

Query: 64   VIEQQLNGIDNLRYVSSESNSDGSMTITATFEQGTNPDTAQVQVQNKLNLATPLLPQEVQ 123
            +IE++L+ + NL Y  S +++ G   ITATF+ GTNP+ AQV VQN++    P LP  V+
Sbjct: 66   LIERELSSVKNLLYFESSTDTSGFAQITATFKPGTNPELAQVDVQNRIKTVEPRLPAVVR 125

Query: 124  QQGIRVTKAVKNFLLVIGLVSEDGSMTKDDLANYIVSNMQDPISRTAGVGDFQVFGAQYA 183
            Q G++   A  +FL+ I L S+DG  ++  L +Y+  +M + + R  GVG  Q+FG++ A
Sbjct: 126  QNGLKFESAASSFLMFISLKSDDGRHSEVALNDYMARSMVEELRRVDGVGRVQLFGSEAA 185

Query: 184  MRIWLDPAKLNKFQLTPVDVKTAVAAQNVQVSSGQLGGLPALPGTQLNATIIGKTRLQTA 243
            MRIW+DPAKL  ++L+  D+  AV  QN Q++ G++GG P + G ++   +  + +L T 
Sbjct: 186  MRIWVDPAKLVAYKLSMSDLSDAVTQQNTQIAPGRVGGAPTVEGQRVTFPVSVQGQLTTP 245

Query: 244  EQFESILLKVNKDGSQVRLGDVAQVGLGGENYAVSAQFNGKPASGLAVKLATGANALDTA 303
            EQF +I+L+ N DGS+V LGDVA+V LG ++Y  S + NGK A+ L V+++ GANA+ T+
Sbjct: 246  EQFAAIVLRANPDGSKVVLGDVARVALGAQSYGESNRENGKLAAALGVQMSPGANAVRTS 305

Query: 304  KALRETIKGLEPFFPPGVKAVFPYDTTPVVTESISGVIHTLIEAVVLVFLVMYLFLQNFR 363
             A++  +  L    PPG+    P+DT P V  SI  V  TL+EA++LVFLVMYLFLQN R
Sbjct: 306  AAVKARLAELAKTMPPGMSYSVPFDTAPFVQISIEKVAQTLLEAMLLVFLVMYLFLQNVR 365

Query: 364  ATIITTMTVPVVLLGTFGILAAAGFSINTLTMFAMVLAIGLLVDDAIVVVENVERVMSEE 423
             T I  +  P+ LLGTF ++ A GFS+N LTMF MVLAIG++VDDAIVVVENVER+M+ E
Sbjct: 366  YTFIPAIVAPIALLGTFTVMLATGFSVNVLTMFGMVLAIGIIVDDAIVVVENVERLMASE 425

Query: 424  GLPPKEATKRSMEQIQGALVGIALVLSAVLLPMAFFGGSTGVIYRQFSITIVSAMGLSVL 483
            GL P+EAT ++M++I GA+VGI LVL AV +PMA  GGS GVIYRQF++++  ++  S  
Sbjct: 426  GLSPREATLKAMKEISGAVVGITLVLIAVFIPMALAGGSVGVIYRQFTLSMAVSILFSAF 485

Query: 484  VALIFTPALCATMLKPLKKGEHHTAKGGFFGWFNRNFDRSVNGYERSVGAILRNKVPFLL 543
            +AL  TPALCAT+LKP+  G HH  KGGFFGWFNR F+R    YE  V A++R +    +
Sbjct: 486  LALTLTPALCATLLKPV-DGAHH-EKGGFFGWFNRMFERMTGRYETRVVAMVR-RSGRAM 542

Query: 544  AYALIVVGMIWL-FARIPTAFLPEEDQGVLFAQVQTPAGSSAERTQVVVDQMREYLLKDE 602
            A  L + G++ L F ++P+AFLPEEDQG     +Q P+ ++ ERT  VV     + +   
Sbjct: 543  AVFLAITGVLALGFWQLPSAFLPEEDQGYFITSIQLPSDATTERTLDVVKAFEAHAVGRP 602

Query: 603  ADTVSSVFTVNGFNFAGRGQSSGMAFIMLKPWDERSKENSVFALAQRAQQHFFTFRDAMV 662
               + +V  V G+ F+G G ++ + F  LK W ER    +  A    AQ+     R+ MV
Sbjct: 603  G--IEAVQAVLGWGFSGSGPNAAIIFTTLKEWHERQGATAP-AEVMAAQEAMGVAREGMV 659

Query: 663  FAFAPPAVLELGNATGFDVFLQDRGGVGHEKLMEARNQFLAKAAQSKILSAVRPNGLNDE 722
                PPA+ ELG ++GF + LQDR   G+  LM A+ Q LA AA+SK+++ V P GL   
Sbjct: 660  INLMPPAIEELGTSSGFSMRLQDRANQGYAALMAAQQQLLAMAAESKLVTGVYPEGLPPG 719

Query: 723  PQYQLTIDDERASALGVTIADINNTLSIALGASYVNDFIDRGRVKKVYIQGEPSARMSPE 782
               +L ID ++A ALGV+ A+I++TLS A+G+ YVNDF + GR+++V IQ E  +RM  E
Sbjct: 720  SSVRLDIDRQKAEALGVSFANISDTLSTAMGSLYVNDFPNAGRMQQVIIQAEARSRMQVE 779

Query: 783  DLQKWYVRNGAGEMVPFSSFAKGEWTYGSPKLSRYNGVEAMEILGAPAPGYSTGEAMAEV 842
            D+ + +VRN AG MV  S     +W+    +L RY G  A+ I G+ APG S+GEAMAE+
Sbjct: 780  DILRLHVRNNAGGMVALSEVVTPQWSDAPLQLVRYLGYPAVRIAGSAAPGASSGEAMAEM 839

Query: 843  ERIAGELPSGIGFSWTGMSYEEKLSGSQMPALFALSVLFVFLCLAALYESWSIPIAVVLV 902
            ER+A +LP G    WTG S +E+ S +Q P L ALS+L VFL LAALYESW+IP+AV+LV
Sbjct: 840  ERLAAKLPPGFAVEWTGQSLQERQSAAQAPLLMALSMLVVFLVLAALYESWTIPLAVMLV 899

Query: 903  VPLGIIGALIATSLRGLSNDVYFLVGLLTTIGLAAKNAILIVEFAKELHEQGRSLYDAAI 962
            VPLG+IGA+ A   RG+ NDV+F VG++T IGL+AKNAILI+EFAK+LHEQG  L +AA 
Sbjct: 900  VPLGLIGAVFAVYARGMPNDVFFKVGMITVIGLSAKNAILIIEFAKQLHEQGMGLIEAAA 959

Query: 963  EACRMRLRPIIMTSLAFILGVVPLTIASGAGAGSQHAIGTGVIGGMISATVLAIFWVPLF 1022
             A R+RLRPI+MTSLAF LGVVPL +ASGA A +QHAIGTGV GGMI+ATVLA+F VP++
Sbjct: 960  AAARLRLRPILMTSLAFALGVVPLMLASGASAETQHAIGTGVFGGMITATVLAVFLVPVY 1019

Query: 1023 FVAVSSL 1029
            FV V SL
Sbjct: 1020 FVFVLSL 1026