Pairwise Alignments

Query, 484 a.a., Probable efflux pump outer membrane protein TtgC from Pseudomonas putida KT2440

Subject, 469 a.a., efflux transporter, outer membrane factor lipoprotein, NodT family from Dechlorosoma suillum PS

 Score =  369 bits (946), Expect = e-106
 Identities = 218/472 (46%), Positives = 286/472 (60%), Gaps = 7/472 (1%)

Query: 1   MTKSLLSLAVTAFILGGCSLIPDYQTPEAPVAAQWPQGPAYSPT-QSADVAAAEQGWRQF 59
           M  S LSL++    LGGCSL P    P  PV   +   P    T +SA  +AA  GWR  
Sbjct: 1   MRLSPLSLSLL-LALGGCSLAPALPKPALPVPDTYGTAPVDEATAKSATASAAAIGWRHM 59

Query: 60  FHDPALQQLIQTSLVNNRDLRVAALNLDAYRAQYRIQRADLFPAVSATGSGSRQRVPANM 119
           F DP LQ+LI+ +L +NRDLR+A LN+   +AQY IQR+   P V A   GSRQR   + 
Sbjct: 60  FGDPRLQRLIEVALEHNRDLRLAVLNVSQVQAQYDIQRSYRVPGVDAGLEGSRQR---SS 116

Query: 120 SQTGES-GITSQYSATLGVSAYELDLFGRVRSLTEQALETYLSSEQARRSTQIALVASVA 178
           S  G S  I    SA+LG+SA+E+DLFGRV SL+E A   YL+SE   R+ +I+L+ +VA
Sbjct: 117 SDGGNSTAIQETRSASLGISAFEVDLFGRVGSLSEAAFARYLASEHGLRAARISLIGAVA 176

Query: 179 NAYYTWQADQALFKLTEETLKTYEESYNLTRRSNEVGVASALDVSQARTAVEGARVKYSQ 238
            AY+  +  +   +LTE TL  + +S +L R+      +S LD++QA   V  A      
Sbjct: 177 EAYFAERLAEEQLRLTELTLADWRQSLDLARKLKLAQQSSGLDIAQAEGQVATAEADLES 236

Query: 239 YQRLVAQDVNSLTVLLGTGIPADLAKPLELDADQ-LAEVPAGLPSDILQRRPDIQEAEHL 297
            QR +AQ  N L +LLGT  PADL  P  L     L ++P GLPSD+L  RPDIQ+AE  
Sbjct: 237 RQRALAQARNGLALLLGTEPPADLPPPTPLAQQPVLTQLPPGLPSDLLAHRPDIQQAEQA 296

Query: 298 LKAANANIGAARAAFFPSISLTANAGSLSPDMGHLFSGGQGTWLFQPQINLPIFNAGSLK 357
           L AANA+IGAARAAFFP + LT + G++SP  G LFSG   TW F PQI+ PIF  G L+
Sbjct: 297 LIAANADIGAARAAFFPRLLLTLSVGAISPSFGSLFSGAHQTWAFTPQISQPIFQGGRLR 356

Query: 358 ASLDYSKIQKDINVAKYEKTIQTAFQEVSDGLAARKTFEEQLQAQRDLVQANQDYYRLAE 417
           A L  +++++   V +YEK IQTAF+EV DGLA   TF  Q+QAQ   V + +    L+ 
Sbjct: 357 AELRLAELRRSAAVVEYEKAIQTAFREVRDGLAGSATFGRQIQAQERAVASAERRRELST 416

Query: 418 RRYRIGIDSNLTFLDAQRNLFSAQQALIGDRLSQLTSEVNLYKALGGGWYEQ 469
            RYR G+DS L  LDAQR  +++Q  L+  R   + + + LYKALGGG  EQ
Sbjct: 417 LRYRAGLDSRLELLDAQRQAYASQLGLLELRRDDIRNAIGLYKALGGGRLEQ 468