Pairwise Alignments

Query, 174 a.a., putative porin-encoding gene from Pseudomonas putida KT2440

Subject, 180 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  114 bits (284), Expect = 1e-30
 Identities = 66/177 (37%), Positives = 103/177 (58%), Gaps = 11/177 (6%)

Query: 1   MKTLVDHLSQYANYHRDPRNIATHFVGIPMIVLAVTILLSRPGWEI-----AGMWLSPAL 55
           MK+ ++ LS Y + H +P NI THFVGIP+I+ +  ++L+   + +      G+ L+ A+
Sbjct: 1   MKSAIEQLSTYKSVHLNPTNIKTHFVGIPLIIWSAFVMLNTIPFSLYSFGSTGLELNVAV 60

Query: 56  LAAAASVWFYLRLDLRFGLVMGLLLGLCLWVGEALAVQSTTLWLGAGLGAFVVGWIIQFI 115
           L A A + +Y  L  +  L +GL+L +   +  +  V          +G FV+GWI Q I
Sbjct: 61  LFACAVLIYYFALHAK--LALGLVLFILPVLYTSFLVSRMEQAWPIAIGVFVIGWIFQLI 118

Query: 116 GHYYEGRKPAFVDDVSGLIIGPLFVVAEAAFMLGLCPTLKRAVEANAGPIAMRQKKA 172
           GH YE  KPAF+DD++ L+IGP F++AE  FMLGL   L  A+     P+A  +++A
Sbjct: 119 GHKYEKAKPAFIDDLNQLLIGPFFLMAELYFMLGLERDLDEAIT----PLARDKRRA 171