Pairwise Alignments

Query, 174 a.a., putative porin-encoding gene from Pseudomonas putida KT2440

Subject, 175 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  117 bits (294), Expect = 8e-32
 Identities = 65/173 (37%), Positives = 101/173 (58%), Gaps = 7/173 (4%)

Query: 1   MKTLVDHLSQYANYHRDPRNIATHFVGIPMIVLAVTILLSRPGWEIAGMW-LSPALLAAA 59
           MK+ V+ LS Y + H +PRNI THF+GIP+I+ +  +L +     +     ++  ++ A 
Sbjct: 1   MKSAVEQLSTYKSVHLNPRNIQTHFIGIPLIIWSAFLLFATIRIPLGDADNVNLGMILAI 60

Query: 60  ASVWFYLRLDLRFGLVMGLLLGLCLWVGEALAVQSTTLWLGAGLGAFVVGWIIQFIGHYY 119
             + +YLRL  +  L + L L   ++  E +A        G  +  F+VGWI Q IGH Y
Sbjct: 61  GIMLYYLRLHAKLALGLALFLAPVIYTTELVAHSENAF--GLAITVFIVGWIFQLIGHRY 118

Query: 120 EGRKPAFVDDVSGLIIGPLFVVAEAAFMLGLCPTLKRAVEANAGPIAMRQKKA 172
           E  KPAFVDD++ L+IGP F++AE  FMLG    L++ + A   PIA+ +++A
Sbjct: 119 EKAKPAFVDDLNQLLIGPFFLMAEVYFMLG----LEKQLNAEITPIAIEKRRA 167