Pairwise Alignments

Query, 624 a.a., Methyl-accepting chemotaxis protein PctA from Pseudomonas putida KT2440

Subject, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  293 bits (751), Expect = 1e-83
 Identities = 200/637 (31%), Positives = 322/637 (50%), Gaps = 29/637 (4%)

Query: 5   LRFSHKILLAA-SLIVILAFSLFTLYNDYLQR---NAI--REDLENYLAEMGASTSTNIR 58
           L   HK++ A+ S +V++A +L       LQ+   NA+  R D  +  A  G S   +IR
Sbjct: 7   LTLKHKLIGASLSAVVVMATALTWFSASQLQQQTSNAVYTRADAISSTAAKGISDWISIR 66

Query: 59  NLFEGRIKLVENLAQNIAQDPANAETLMGQNALISSFLTVYLGKVDGG-FSVRPDAKMPD 117
                      + A N   +  N    + Q      F  ++ G  DG  +   P+    D
Sbjct: 67  KSI--------STAFNAHIEAQNVVPYLQQARNAGGFDDIFYGTTDGAMYRSHPERNRAD 118

Query: 118 GYDPRTRPWYKDGMNASGATLTEPYIDMTTNKMVIGILSKV---SSSVGVVGGDLALDGL 174
            YDPRTRPWYKD  +A    +T  Y D  T  +++ I   V    +  GVVG D+ +D L
Sbjct: 119 -YDPRTRPWYKDAASAGKQIITTAYSDAITGALLVTIAEPVRLNGNMSGVVGADVLIDQL 177

Query: 175 VQIINSLNFGGMGYAFLVNDQ-GKILVHPDKDLVMK---SLSDLFPQHTPKLT---GELT 227
           +  + S++ G      L++ Q G  L HPDK L++K   +LS      T +     GEL 
Sbjct: 178 IADVISMDAGKNAQTMLIDGQNGSFLAHPDKSLLLKPVTTLSSALDMRTIERAANQGELL 237

Query: 228 EVQSDGQTRLLTFSPITGLPSANWYIGLSVDKDKAFSMLSTFRTSAVIATVVAVVIIIGL 287
            ++ +G  +   F   T +P   WY  + +D D  ++  S   T  +   ++  VI++ +
Sbjct: 238 ALKLNGVEKFFFF---TAVPDTPWYFAVQMDSDTEYASHSELLTGLITTALLITVIVVVI 294

Query: 288 LGLLIRVLMQPLHTMTRAMEDIAEGEGDLTKRLHIHSHDEFGVLGNAFNRFVERIHSSIR 347
           +  L+  L + L  +++A+E+IA G+ DLT+RL   S DE G L + FN FV  +H+ + 
Sbjct: 295 VSWLVSFLFRDLGRVSKALEEIASGDADLTQRLEPRSDDEVGQLASNFNTFVSNMHTMVL 354

Query: 348 EVSSATEQVNEVALRVISASNSSMTNSDEQSNRTNSVAAAINELGAAAQEIAGNAAQASQ 407
           ++S  +  + + +    + +    +    Q +  N VA AINE+ AA QEIAGNA   +Q
Sbjct: 355 KLSHVSAALAQQSKVTAAQAEERSSRIRLQQDEINMVATAINEMAAATQEIAGNADHTAQ 414

Query: 408 HASSARLLAEEGQQVVERNIAAMNRLSDLIVTSSAHIETLNSKTVNIGQILEVITSISQQ 467
           +A  A      G   V +   ++  L++ +  ++  I+ L +    I  IL  I +I++Q
Sbjct: 415 NAGEAVTACVHGAGQVTQTQRSIQSLAEEVQVATEVIQELEAHGHQISTILSTIQNIAEQ 474

Query: 468 TNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAQQVQTMIEELQVGARESVDT 527
           TNLLALNAAIEAARAGE GRGFAVVADEVR L+ RT  S +++Q MIE LQ    ++V  
Sbjct: 475 TNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTKEIQQMIETLQATTGKAVGI 534

Query: 528 MEQSQRHSQDSMQIANQAGERLDSVTVRIGEIDGMNQSVATATEEQTAVVEAINMDINEI 587
           M+ S+R +  S+  AN+A   L+ +   +  I  M   +A+A EEQ +V   I  +   I
Sbjct: 535 MDDSRRLADTSVDDANEASVSLEQIHKTVERISDMATQIASAAEEQASVTSEITRNTVGI 594

Query: 588 NMLNQEGVENLQATLRACSDLEQQAGRLKHLVGSFRI 624
             ++ +  +   +     ++L + +  L+  +  F++
Sbjct: 595 RDVSNDLAQEAHSAAEQAAELSELSHELEQEIRRFKL 631