Pairwise Alignments

Query, 624 a.a., Methyl-accepting chemotaxis protein PctA from Pseudomonas putida KT2440

Subject, 640 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  258 bits (659), Expect = 6e-73
 Identities = 158/462 (34%), Positives = 246/462 (53%), Gaps = 1/462 (0%)

Query: 163 GVVGGDLALDGLVQIINSLNFGGMGYAFLVNDQGKILVHPDKDLVMKSLSDLFPQHTPKL 222
           GV G  L+L+ L   I     G  G  +L +  G+I +H       K LS L  +    L
Sbjct: 178 GVAGVGLSLNSLADNIKQYKIGEQGRVYLTDGNGQIKIHGQSQFAGKQLSALGIKDPQAL 237

Query: 223 TGELTEVQSDGQTRLL-TFSPITGLPSANWYIGLSVDKDKAFSMLSTFRTSAVIATVVAV 281
             + T   S+     + T      +PS  WY+   V +D+ F  ++       +  ++  
Sbjct: 238 LSQQTFATSEYDNNGVDTLVASRYIPSIGWYLIAEVPQDELFGAINKASWQLALMGLILA 297

Query: 282 VIIIGLLGLLIRVLMQPLHTMTRAMEDIAEGEGDLTKRLHIHSHDEFGVLGNAFNRFVER 341
            II+     LI  L+ P   +   ++ I EGEGDL+ RL     DE G +  ++N+FV  
Sbjct: 298 AIIMFTSAWLINRLISPFGELADMLKSIGEGEGDLSLRLDDSRQDETGSMAASYNQFVTY 357

Query: 342 IHSSIREVSSATEQVNEVALRVISASNSSMTNSDEQSNRTNSVAAAINELGAAAQEIAGN 401
           +  +++ VS+    + +   R+ + +       ++Q ++   VA AI+E+G  AQEIA +
Sbjct: 358 LSKTLQSVSATANDLFQAVERIDNQAKHMEHEINDQVSKIEQVATAIHEMGMTAQEIASS 417

Query: 402 AAQASQHASSARLLAEEGQQVVERNIAAMNRLSDLIVTSSAHIETLNSKTVNIGQILEVI 461
           A  A+++A  A     +G Q V+  IA++  +S+ ++T+S  +  L     +I  +LEVI
Sbjct: 418 ANNAAENAQVADQSVNQGNQSVQNTIASVASMSEQLLTTSETVSQLAEDASSIDTVLEVI 477

Query: 462 TSISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAQQVQTMIEELQVGA 521
             +S+QTNLLALNAAIEAARAGE GRGFAVVADEVR LA R+  S + ++ +IE+LQ   
Sbjct: 478 RGVSEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRSHASTEDIRHIIEKLQAKT 537

Query: 522 RESVDTMEQSQRHSQDSMQIANQAGERLDSVTVRIGEIDGMNQSVATATEEQTAVVEAIN 581
            E V+ + QS   SQ S Q A+ +GE L S+   I  +  M+  +ATATEEQ+ VV  IN
Sbjct: 538 TEVVNAIGQSTNQSQQSQQEASLSGEHLHSIAENIQAMSEMSMQIATATEEQSNVVGEIN 597

Query: 582 MDINEINMLNQEGVENLQATLRACSDLEQQAGRLKHLVGSFR 623
             +  I  +++   + ++ T   CSDL + A +L  LV  F+
Sbjct: 598 PHVTAIADISRSSSDVVRQTSLDCSDLREMAVQLNELVSRFK 639