Pairwise Alignments

Query, 282 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

Subject, 449 a.a., Cyclic nucleotide-binding from Synechococcus elongatus PCC 7942

 Score =  113 bits (282), Expect = 9e-30
 Identities = 91/286 (31%), Positives = 136/286 (47%), Gaps = 26/286 (9%)

Query: 3   MDLNAEVDQ-----LVRQSQTWIPLIMEYGSRVLLALLT-------LAVGWWIINKVSAR 50
           MDL   ++Q     L+R   + I L    GS +LLA+L          +  W+   V  R
Sbjct: 1   MDLFDRLEQWTSTPLLRLGSSQISL----GSLILLAVLAGLLLYLMRQMNRWLREIVLVR 56

Query: 51  LGKLVGLRNADLALQGFISTLANIVLKVLLLVSVASMIGIETTSFVAAIGAAGLAIGLAL 110
           LG   G R A       I+T+ + +L  L+L+     IG++ +S     G  GL + L L
Sbjct: 57  LGVERGPREA-------IATITSYLLTSLILIIGLQAIGVDLSSLTVLAGVLGLGLSLGL 109

Query: 111 QGSLANFAGGVLILMFRPFRIGDWIEAQGVAGTVDSIQIFHTVLRTGDNKTVIMPNGSLS 170
           Q   A+F  G+ +L+ +P ++GD +   GV GTV+ I    T +RT D+  VI+PN  L 
Sbjct: 110 QRLAASFFSGITLLIEQPIKVGDLVSLDGVLGTVEKISFRATAVRTLDHVHVIVPNDRLV 169

Query: 171 NGIITNTNRQPT-RKVVFDVGVDYEADLQKARNVLLELAK-DPRVLQDPAPQAVVSTLGD 228
           +  I N + Q T  +V   + V Y  D     + LL +A+ D RVL  PAP     + GD
Sbjct: 170 DSNIINWSYQNTASRVHLPISVAYGTDPLWLTDALLTVARQDSRVLTQPAPTVWFRSFGD 229

Query: 229 SSITVSLRLWTKTSDYWD-VMFMLNEYARDRLKAEGIDIPFPQRVI 273
           S++   L  WT   +  + +   LN       +   I IPFPQ V+
Sbjct: 230 STLNFELLFWTDRPELIEPIKSDLNFRIASEFERREIQIPFPQLVL 275