Pairwise Alignments

Query, 282 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

Subject, 285 a.a., mechanosensitive ion channel protein MscS from Klebsiella michiganensis M5al

 Score =  196 bits (497), Expect = 6e-55
 Identities = 106/283 (37%), Positives = 171/283 (60%), Gaps = 15/283 (5%)

Query: 4   DLNAEVDQLVRQSQTWI----PLIMEYGSRVLLALLTLAVGWWIINKVSARLGKLVGLRN 59
           DLN  VD  +  + +W+     L++ Y   ++ AL  + VG  +   VS  + +L+  R+
Sbjct: 3   DLNV-VDS-INNAGSWLVRNQALLLSYAVNIVAALAIIIVGLIVARIVSNTVNRLMRARH 60

Query: 60  ADLALQGFISTLANIVLKVLLLVSVASMIGIETTSFVAAIGAAGLAIGLALQGSLANFAG 119
            D  +  F+S L    +    L++    +G++T S +A +GAAGLA+GLALQGSL+N A 
Sbjct: 61  IDATVADFLSALVRYAVIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAA 120

Query: 120 GVLILMFRPFRIGDWIEAQGVAGTVDSIQIFHTVLRTGDNKTVIMPNGSLSNGIITNTNR 179
           GVL+++FRPFR G++++  G+AGTV ++QIF T LR+ D K V++PNG +  G I N +R
Sbjct: 121 GVLLVVFRPFRAGEYVDLGGIAGTVLNVQIFSTTLRSADGKIVVVPNGKIIAGNIINFSR 180

Query: 180 QPTRKVVFDVGVDYEADLQKARNVLLELAK-DPRVLQDPAPQAVVSTLGDSSITVSLRLW 238
           +P R+  F +GV Y+AD+ K + +L  + + D R+L+D      ++ LG SS+   +R+W
Sbjct: 181 EPVRRNEFIIGVAYDADIDKVKQLLTNIIESDERILKDREMTVRLNELGASSVNYVVRVW 240

Query: 239 TKTSD----YWDVMFMLNEYARDRLKAEGIDIPFPQRVIRVVQ 277
           +K+SD    YWDV+    E  +    A GI  P+PQ  + V++
Sbjct: 241 SKSSDLQSVYWDVL----ERIKRDFDANGIGFPYPQMDVHVIR 279