Pairwise Alignments

Query, 676 a.a., Sensory box histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 1222 a.a., PAS/PAC sensor hybrid histidine kinase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  116 bits (291), Expect = 6e-30
 Identities = 101/335 (30%), Positives = 150/335 (44%), Gaps = 55/335 (16%)

Query: 355  VAKIERVTWPKGDDLRHYALTFYPLTGGGGR--GVVIRIDDITQRLSLEEMMVQSEKMLS 412
            VA     T+     +  +  T YP+T   GR   V    +D+   ++LE  + Q++KM +
Sbjct: 788  VATATPATFRDARSIHIFEHTLYPITDETGRVHRVAWLAEDVAHEVALERQLRQAQKMEA 847

Query: 413  VGGLAAGMAHEINNPLGAILHNVQNIRRRLSSDLPRNQEQAEELGIDLATINRYLDSREV 472
            VG LA G+AH+ NN LG I+ N++ +R               + G+      R       
Sbjct: 848  VGTLAGGIAHDFNNILGVIMSNIEMLR---------------DTGLTGRAATR------- 885

Query: 473  PQLLDGIQQAGARAAKIVTHMLSFSRRSNRQLVPCELPALIDQALEIAGNDFDLAIGFDF 532
                D I +A  RA  +V  +L+F R ++      +L   +  AL +       ++    
Sbjct: 886  ---ADRILRAALRARDVVRQLLAFGRPADEPYATLDLCRTVADALHMVKPSIPASV---- 938

Query: 533  KGQAIVRQFDPDLGPVPCTAN--ELEQVLLNLLKNAAQAIHQRPQPSE----------PG 580
                 +R   P + P+P   +  ++ QVLLNL  NA   +H  P               G
Sbjct: 939  ----TLRTLLP-VAPLPVHGDITQIHQVLLNLCTNA---VHAMPDGGVLDVSLAALVLGG 990

Query: 581  RITLR--TRLNPP-WAEVQVEDNGVGMPEAVRKRTFEPFFTTKEIGQGTGLGLSVSYFII 637
               LR    L+P  +A + V D+G GM  A  +R FEPFFTTK  G G+GLGLS+ + I+
Sbjct: 991  DEVLRGYPELSPGRYACLSVADSGQGMTAAQLERVFEPFFTTKPQGMGSGLGLSMVHGIV 1050

Query: 638  TNNHKGQMEVQSTPGQGTCFTLRLPLTQPAAAVPA 672
               H G +   S P QG CF + LPL    AA  A
Sbjct: 1051 -RQHGGTVRAHSQPEQGACFDVLLPLADMLAAAEA 1084