Pairwise Alignments

Query, 939 a.a., protein translocation complex, ATPase subunit SecA from Pseudomonas putida KT2440

Subject, 948 a.a., preprotein translocase subunit SecA from Synechococcus elongatus PCC 7942

 Score =  528 bits (1359), Expect = e-154
 Identities = 284/524 (54%), Positives = 362/524 (69%), Gaps = 19/524 (3%)

Query: 33  LLKKLFGSKNEREVKRMLKTVSIVNAFEEKMVALSDEQLRGKTAEFKERL--------AK 84
           +L  L G  N R+VK+    V+ +N  EE +  LSD+ L  KTAEF+++L        A+
Sbjct: 1   MLNLLLGDPNVRKVKKYKPLVTEINLLEEDIEPLSDKDLIAKTAEFRQKLDKVSHSPAAE 60

Query: 85  GETLDQLLPEAFAVAREAGKRVMGMRHFDVQLIGGMTLHEGMIAEMRTGEGKTLVGTLAV 144
            E L +LLPEAFAV REA KRV+G+RHFDVQ+IGGM LH+G IAEM+TGEGKTLV TL  
Sbjct: 61  KELLAELLPEAFAVMREASKRVLGLRHFDVQMIGGMILHDGQIAEMKTGEGKTLVATLPS 120

Query: 145 YLNALSGKGVHVVTVNDYLARRDANWMRPLYEFLGLSVGIVSAFQPPEEKRAAYAADITY 204
           YLNALSGKG HVVTVNDYLARRDA WM  ++ FLGLSVG++     PEE+R  Y  DITY
Sbjct: 121 YLNALSGKGAHVVTVNDYLARRDAEWMGQVHRFLGLSVGLIQQGMSPEERRRNYNCDITY 180

Query: 205 GTNNEFGFDYLRDNMAFSQDEKFQRELNFAVIDEVDSILIDEARTPLIISGQAEDSSKLY 264
            TN+E GFDYLRDNMA   +E  QR  N+AVIDEVDSILIDEARTPLIISGQ +  S+ Y
Sbjct: 181 ATNSELGFDYLRDNMAAVIEEVVQRPFNYAVIDEVDSILIDEARTPLIISGQVDRPSEKY 240

Query: 265 IEINRLIPRLTQHIEEVEGQVTQEGHFTIDEKSRQVELNEAGHQFIEEMLAQAGLLAEGE 324
           +  +  +  L Q     + +   +G + +DEK R V L + G    E++L  + L    +
Sbjct: 241 MRASE-VAALLQRSTNTDSEEEPDGDYEVDEKGRNVLLTDQGFINAEQLLGVSDLFDSND 299

Query: 325 SLYSAHNLGLLTHVYAGLRAHKLFHRNVEYIVQDGQVLLIDEHTGRTMPGRRLSEGLHQA 384
               AH      +++  ++A +LF ++V YIV+ G+++++DE TGR MPGRR S+GLHQA
Sbjct: 300 PW--AH------YIFNAIKAKELFIKDVNYIVRGGEIVIVDEFTGRVMPGRRWSDGLHQA 351

Query: 385 IEAKENLNIQAESQTLASTTFQNYFRLYTKLSGMTGTADTEAFEFQSIYGLNVMVIPPNK 444
           +E+KE + IQ E+QTLAS T+QN+F LY KLSGMTGTA TE  EF+  Y L V V+P N+
Sbjct: 352 VESKEGVEIQPETQTLASITYQNFFLLYPKLSGMTGTAKTEELEFEKTYKLEVTVVPTNR 411

Query: 445 PLARKDYNDLVYLTADEKYAAIIADIKESMKLGRPVLVGTATIETSEHMSNLLKKEGIDH 504
              R+D  D+VY T   K+ AI AD  E    GRPVLVGT ++E SE +S LL ++GI H
Sbjct: 412 VSRRRDQPDVVYKTEIGKWRAIAADCAELHAEGRPVLVGTTSVEKSEFLSQLLNEQGIPH 471

Query: 505 KVLNAKYH--EKEAEIIAQAGAPGALTIATNMAGRGTDILLGGN 546
            +LNAK    E+EAEI+AQAG  GA+TI+TNMAGRGTDI+LGGN
Sbjct: 472 NLLNAKPENVEREAEIVAQAGRRGAVTISTNMAGRGTDIILGGN 515



 Score =  228 bits (582), Expect = 1e-63
 Identities = 124/314 (39%), Positives = 187/314 (59%), Gaps = 13/314 (4%)

Query: 549 AEVAALENPTAEQIAQIKADWQKRHQ--------QVIETGGLHVIASERHESRRIDNQLR 600
           AE A  ++P  +++ +     +K ++        +V+E GGLHVI +ERHESRR+DNQLR
Sbjct: 618 AEKAPTDDPVIQKLREAYQQVRKEYEAVTKQEQAEVVELGGLHVIGTERHESRRVDNQLR 677

Query: 601 GRSGRQGDPGSSRFYLSLEDSLMRIFASDRVKNFMKALGMQSGEAIEHRMVTNAIEKAQR 660
           GR+GRQGDPGS+RF+LSLED+L+RIF  DRV   M A  ++    IE  M+T ++E AQ+
Sbjct: 678 GRAGRQGDPGSTRFFLSLEDNLLRIFGGDRVAKLMNAFRVEEDMPIESGMLTRSLEGAQK 737

Query: 661 KVEGRNFDIRKQLLEYDDVANEQRKVIYHMRNSLLAAENIGDTIVEFRKEVLDATISQHI 720
           KVE   +DIRKQ+ EYD+V N QR+ IY  R  +L    + + ++++ +  +D  +  HI
Sbjct: 738 KVETYYYDIRKQVFEYDEVMNNQRRAIYAERRRVLEGRELKEQVIQYGERTMDEIVDAHI 797

Query: 721 PPQSLPEQWDVAGLEASLASDFAIKLPIRQWLDEDDHLYEETLREKLLSEITTAYTEKE- 779
                 E+WD+  L  +    F   L   +    +D L  E ++  L  ++  AY  KE 
Sbjct: 798 NVDLPSEEWDLEKL-VNKVKQFVYLLEDLEAKQLED-LSPEAIKIFLHEQLRIAYDLKEA 855

Query: 780 --DQAGLEALRTFEKQILLRVLDDLWKDHLSTMDHLRHGIHLRGYAQKNPKQEYKRESFS 837
             DQ     +R  E+  +L+ +D LW++HL  M+ LR  + LRGY QK+P  EYK E + 
Sbjct: 856 QIDQIQPGLMRQAERYFILQQIDTLWREHLQAMEALRESVGLRGYGQKDPLLEYKSEGYE 915

Query: 838 LFQELLESIKRDTI 851
           LF E++ +I+R+ I
Sbjct: 916 LFLEMMTAIRRNVI 929