Pairwise Alignments

Query, 939 a.a., protein translocation complex, ATPase subunit SecA from Pseudomonas putida KT2440

Subject, 908 a.a., preprotein translocase, SecA subunit (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  905 bits (2339), Expect = 0.0
 Identities = 473/916 (51%), Positives = 632/916 (68%), Gaps = 27/916 (2%)

Query: 33  LLKKLFGSKNEREVKRMLKTVSIVNAFEEKMVALSDEQLRGKTAEFKERLAKGETLDQLL 92
           + KK+FG+ N+R+VK +   V+ +NA E +  AL D  L  KT EFK+R+A GE+LD LL
Sbjct: 7   ITKKVFGTPNDRKVKSVRPLVAKINALEPEFQALDDAGLIAKTEEFKQRIAAGESLDDLL 66

Query: 93  PEAFAVAREAGKRVMGMRHFDVQLIGGMTLHEGMIAEMRTGEGKTLVGTLAVYLNALSGK 152
           PEAFA ARE  +R +G+R FD QL+GG+ LH+G I+EM+TGEGKTLV TL  YLNAL+GK
Sbjct: 67  PEAFANAREGARRALGLRAFDTQLMGGIFLHQGNISEMKTGEGKTLVATLPAYLNALTGK 126

Query: 153 GVHVVTVNDYLARRDANWMRPLYEFLGLSVGIVSAFQPPEEKRAAYAADITYGTNNEFGF 212
           GVH+VTVNDYLARRDA WM  +Y  LG++ G+V  FQ  +EK AAYAADITY TNNE GF
Sbjct: 127 GVHIVTVNDYLARRDAEWMGKVYAQLGMTCGVVVPFQQEDEKHAAYAADITYATNNELGF 186

Query: 213 DYLRDNMAFSQDEKFQRELNFAVIDEVDSILIDEARTPLIISGQAEDSSKLYIEINRLIP 272
           DYLRDNM     +  QR  ++A++DEVDSILIDEARTPLIISG ++D S LY+ I+++IP
Sbjct: 187 DYLRDNMKSELSQMSQRGHHYAIVDEVDSILIDEARTPLIISGPSQDKSDLYVTIDKVIP 246

Query: 273 RLTQHIEEVEGQVTQEGHFTIDEKSRQVELNEAGHQFIEEMLAQAGLLAEGESLYSAHNL 332
            L             E H+TIDEK+R V   + G++F+E+ L   G+L E +SLY   + 
Sbjct: 247 ELV------------EEHYTIDEKTRGVSFTDEGNEFLEDRLHALGILPEEQSLYDPEST 294

Query: 333 GLLTHVYAGLRAHKLFHRNVEYIVQDGQVLLIDEHTGRTMPGRRLSEGLHQAIEAKENLN 392
            ++ H+  GLRAHKLF+++ +YIV++G+V+LIDE TGR  PGRRLSEGLHQA+EAKE + 
Sbjct: 295 TIVHHINQGLRAHKLFNKDQQYIVRNGEVVLIDEFTGRMTPGRRLSEGLHQALEAKEGVE 354

Query: 393 IQAESQTLASTTFQNYFRLYTKLSGMTGTADTEAFEFQSIYGLNVMVIPPNKPLARKDYN 452
           I+ E+ TLAS TFQNYFRLY KL GMTGTA TEA EF  IYGL V+ +P N+P+ R+D +
Sbjct: 355 IKPENVTLASVTFQNYFRLYDKLGGMTGTAATEAEEFAEIYGLGVVEVPTNRPIQREDEH 414

Query: 453 DLVYLTADEKYAAIIADIKESMKLGRPVLVGTATIETSEHMSNLLKKEGIDHKVLNAKYH 512
           D +Y T  EK+ AI+  IKE+   G+P+LVGT +IE SE++S LLKKE + H VLNA+ H
Sbjct: 415 DQIYRTVQEKFDAIVKTIKEAHAKGQPILVGTTSIEKSEYLSQLLKKEDVPHNVLNARQH 474

Query: 513 EKEAEIIAQAGAPGALTIATNMAGRGTDILLGGNWEAEV--AALENPTA---EQIAQIKA 567
           E+EA+I+A AG  GA+TIATNMAGRGTDI LGGN E  V  A  E P A   E   +I+A
Sbjct: 475 EQEAQIVADAGKLGAVTIATNMAGRGTDIQLGGNVEMRVLQALAETPEANPDEIRTRIEA 534

Query: 568 DWQKRHQQVIETGGLHVIASERHESRRIDNQLRGRSGRQGDPGSSRFYLSLEDSLMRIFA 627
           +  +  ++V+E GGL V+A+ERHESRRIDNQLRGRSGRQGDPG S F+LSLED LMRIF 
Sbjct: 535 EVAENKRKVLEAGGLFVLATERHESRRIDNQLRGRSGRQGDPGRSAFFLSLEDDLMRIFG 594

Query: 628 SDRVKNFMKALGMQSGEAIEHRMVTNAIEKAQRKVEGRNFDIRKQLLEYDDVANEQRKVI 687
           S+R+   + +LGM+ GEAI H  V  ++EKAQ KVEGRNFDIRKQLL++DDV N+QRK I
Sbjct: 595 SERLDKVLSSLGMKEGEAIVHPWVNKSLEKAQAKVEGRNFDIRKQLLKFDDVMNDQRKTI 654

Query: 688 YHMRNSLLAAENIGDTIVEFRKEVLDATISQHIPPQSLPEQWDVAGLEASLASDFAIKLP 747
           +  R  ++  +++ +   + R +V++  + + IPP+S  +QW+V GL A++         
Sbjct: 655 FSQRMEIMETDDVAEITRDMRHQVINDLVDEFIPPKSYADQWNVEGLYAAILEKVGADTD 714

Query: 748 IRQWLDEDDHLYEETLREKLLSEITTAYTEKEDQAGLEALRTFEKQILLRVLDDLWKDHL 807
           + +W +E+  + +E +RE+L          K  Q G+E +R  EKQ+LL+ +D  W++HL
Sbjct: 715 VIKWAEEEG-VDDEIIRERLEKASDEFMAAKAAQFGVENMRRIEKQLLLQTIDQKWREHL 773

Query: 808 STMDHLRHGIHLRGYAQKNPKQEYKRESFSLFQELLESIKRDTIRVLSHVQVRREDPAEE 867
            T++HLR  +  RGYAQ++P  EYK E F LF+ +L+S++ D    L  ++   E+  E+
Sbjct: 774 LTLEHLRSVVGFRGYAQRDPLNEYKTEGFQLFESMLDSLRVDVTDKLGKIRPLTEE--EQ 831

Query: 868 EARLRREAEELASRMQFQHA------AAPGLGSEQLSEEGAEVAVASAPVRNDQKLGRNE 921
           +A +R+ A + A+      A      A  G G+E      AE  V S P       GRN+
Sbjct: 832 QAMMRQIAAQQAAAQAANEAARQPQPAMAGAGAEAEEGTPAEGFVESDPTTWGNP-GRND 890

Query: 922 PCWCGSGKKFKHCHGQ 937
            C CGSGKKFKHCHG+
Sbjct: 891 RCPCGSGKKFKHCHGR 906