Pairwise Alignments

Query, 939 a.a., protein translocation complex, ATPase subunit SecA from Pseudomonas putida KT2440

Subject, 960 a.a., preprotein translocase subunit SecA from Bifidobacterium breve UCC2003

 Score =  766 bits (1977), Expect = 0.0
 Identities = 427/971 (43%), Positives = 600/971 (61%), Gaps = 103/971 (10%)

Query: 45  EVKRMLKTVSIVNAFEEKMVALSDEQLRGKTAEFKERLAKGETLDQLLPEAFAVAREAGK 104
           ++K++      VNA E+++ ALSDE L+ +T +FK+++  G++LD ++PEAFA  RE  K
Sbjct: 16  QLKKLENVAKAVNALEDEISALSDEDLKAQTPKFKQQIENGKSLDDIMPEAFATVREVSK 75

Query: 105 RVMGMRHFDVQLIGGMTLHEGMIAEMRTGEGKTLVGTLAVYLNALSGKGVHVVTVNDYLA 164
           R +G RHFDVQL+GG  LH G IAEM+TGEGKTLV TL  YLNAL GKGVHVVTVNDYLA
Sbjct: 76  RTLGQRHFDVQLMGGAALHWGNIAEMKTGEGKTLVATLPTYLNALEGKGVHVVTVNDYLA 135

Query: 165 RRDANWMRPLYEFLGLSVGIVSAFQPPEEKRAAYAADITYGTNNEFGFDYLRDNMAFSQD 224
              +  M  +Y FLG++VG +   Q P E+R  Y ADITYGTNNEFGFDYLRDNMA+ + 
Sbjct: 136 SYQSELMGRIYRFLGMNVGCIITDQKPPERRKQYNADITYGTNNEFGFDYLRDNMAWEKA 195

Query: 225 EKFQRELNFAVIDEVDSILIDEARTPLIISGQAE-DSSKLYIEINRLIPRLTQHIEEVEG 283
           +  QR  ++A++DEVDSILIDEARTPLIISG AE D ++ Y +  +L+ +L         
Sbjct: 196 DLVQRGHHYAIVDEVDSILIDEARTPLIISGPAEGDVTRWYRQFAKLVLKL--------- 246

Query: 284 QVTQEGHFTIDEKSRQVELNEAGHQFIEEMLAQAGLLAEGESLYSAHNLGLLTHVYAGLR 343
             T++  + +DEK + V + + G   +E+ L         ++LY   N  L+ ++   ++
Sbjct: 247 --TRDEDYDVDEKKKVVGILDPGITKVEDFLGI-------DNLYEPANTALIGYLNNAIK 297

Query: 344 AHKLFHRNVEYIVQDGQVLLIDEHTGRTMPGRRLSEGLHQAIEAKENLNIQAESQTLAST 403
           A +LF ++ +Y+V  G+VL++DEHTGR +PGRR +EGLHQAIEAKE + ++AE+QT A+ 
Sbjct: 298 AKELFLKDKDYVVTQGEVLIVDEHTGRILPGRRYNEGLHQAIEAKEGVEVKAENQTFATI 357

Query: 404 TFQNYFRLYTKLSGMTGTADTEAFEFQSIYGLNVMVIPPNKPLARKDYNDLVYLTADEKY 463
           T QNYFR+Y KL+GMTGTA+TEA EF + Y L V+ I  NKP+ RKD +DL++ T  EK 
Sbjct: 358 TLQNYFRMYDKLAGMTGTAETEAAEFMNTYKLGVLPIKTNKPMIRKDQDDLIFRTKKEKL 417

Query: 464 AAIIADIKESMKLGRPVLVGTATIETSEHMSNLLKKEGIDHKVLNAKYHEKEAEIIAQAG 523
           AAI+ D+ +    G+PVL+GTA++E+SE +S LL    I H+VLNAK HEKEA ++A AG
Sbjct: 418 AAIVKDVAKRHAKGQPVLLGTASVESSEVVSTLLDVAKIPHQVLNAKQHEKEAAVVAVAG 477

Query: 524 APGALTIATNMAGRGTDILLGGNWE--------AEVAALENPTAE-------QIAQIKAD 568
             GA+T+ATNMAGRGTDI+LGGN E        +E  + E+   E        + +IKA 
Sbjct: 478 RKGAVTVATNMAGRGTDIMLGGNVEFLADAKLKSEGYSPEDTPEEYEKRWPGTLNEIKAQ 537

Query: 569 WQKRHQQVIETGGLHVIASERHESRRIDNQLRGRSGRQGDPGSSRFYLSLEDSLMRIFAS 628
            +  H++V E GGL+V+ +ERHESRRIDNQLRGRSGRQGDPG SRFYLSLED LMR+F +
Sbjct: 538 VKDEHEEVKELGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLEDDLMRLFNT 597

Query: 629 DRVKNFMKALGMQSGEAIEHRMVTNAIEKAQRKVEGRNFDIRKQLLEYDDVANEQRKVIY 688
             V   M A GM+ G+ IE + VT  +  AQ+ VE RN++IRK +L+YDDV N+QR VIY
Sbjct: 598 QLVAQVM-AKGMEEGQPIEAKSVTKGVRTAQKAVESRNYEIRKNVLKYDDVMNKQRTVIY 656

Query: 689 HMRNSLLAAENIGDTIVEFRKEVLDATISQHIPPQSLPEQWDVAGLEASLASDFAIKLPI 748
             R ++L  E+I   I+ F  + +++ I         P+ WD  GL  +L +    K   
Sbjct: 657 SERQAVLKGEDIHKDILRFISDTVESYIKGANKGSEKPKDWDWEGLFKALNTVIPTK--- 713

Query: 749 RQWLDEDD----------HLYEETLREKLLSEITTAYTEKEDQAGLEALRTFEKQILLRV 798
              +DED+              E +R+ ++ +    Y E E+  G   LR  E++++L V
Sbjct: 714 ---VDEDEARKIVGGLKGAKAVEAVRDLIVEDARQQYGEMEETIGETGLRDLERRVVLAV 770

Query: 799 LDDLWKDHLSTMDHLRHGIHLRGYAQKNPKQEYKRESFSLFQELLESIKRDTIRVLSHVQ 858
           LD  W++HL  MD+L+ GI LRG  Q++P  EY+RE + ++  ++E+IK +++++L H+ 
Sbjct: 771 LDRKWREHLYEMDYLKDGIGLRGMGQRDPLVEYQREGYQMYNSMIEAIKEESVQLLFHID 830

Query: 859 VRREDPAEEEARLRREAEELASRMQFQHAAAPGLGSE--------QLSEEGAEVAVAS-- 908
           V++    E+      E++E A  +    A  P    E        ++ EE A+ A+A   
Sbjct: 831 VKQVASTEDAVDEVEESDETADSVTV--ATGPDENGESEVEAAEGEVEEEDAKQAIAESA 888

Query: 909 ---------------APV-------------------------RNDQKLGRNEPCWCGSG 928
                          AP+                         R     G+N PC CGSG
Sbjct: 889 AVSESGESTLPVAGPAPISHAEGKVPANKRPKSDELKTPWADGRTFPGTGKNAPCPCGSG 948

Query: 929 KKFKHCHGQIE 939
           +K+K CHGQ E
Sbjct: 949 RKYKMCHGQNE 959