Pairwise Alignments

Query, 939 a.a., protein translocation complex, ATPase subunit SecA from Pseudomonas putida KT2440

Subject, 908 a.a., preprotein translocase subunit SecA (RefSeq) from Shewanella sp. ANA-3

 Score = 1161 bits (3004), Expect = 0.0
 Identities = 583/911 (63%), Positives = 713/911 (78%), Gaps = 5/911 (0%)

Query: 29  MFAPLLKKLFGSKNEREVKRMLKTVSIVNAFEEKMVALSDEQLRGKTAEFKERLAKGETL 88
           MF  LL K+FGS+N+R +K + K V+ +NA E     L+DEQL+ KTAEF+ERLA G +L
Sbjct: 1   MFGKLLTKVFGSRNDRTLKGLQKVVNKINALEADYEKLTDEQLKAKTAEFRERLAAGASL 60

Query: 89  DQLLPEAFAVAREAGKRVMGMRHFDVQLIGGMTLHEGMIAEMRTGEGKTLVGTLAVYLNA 148
           + ++ EAFA  REA KRV  MRHFDVQL+GGM L    IAEMRTGEGKTL  TL  YLNA
Sbjct: 61  ESIMAEAFATVREASKRVFEMRHFDVQLLGGMVLDSNRIAEMRTGEGKTLTATLPAYLNA 120

Query: 149 LSGKGVHVVTVNDYLARRDANWMRPLYEFLGLSVGIVSAFQPPEEKRAAYAADITYGTNN 208
           L+GKGVHV+TVNDYLARRDA   RPL+EFLGL+VGI  A    + K+ AY ADITYGTNN
Sbjct: 121 LTGKGVHVITVNDYLARRDAENNRPLFEFLGLTVGINVAGLGQQAKKDAYNADITYGTNN 180

Query: 209 EFGFDYLRDNMAFSQDEKFQRELNFAVIDEVDSILIDEARTPLIISGQAEDSSKLYIEIN 268
           EFGFDYLRDNMAFS  E+ QR L++A+IDEVDSILIDEARTPLIISG AEDSS+LYI+IN
Sbjct: 181 EFGFDYLRDNMAFSPQERVQRPLHYALIDEVDSILIDEARTPLIISGAAEDSSELYIKIN 240

Query: 269 RLIPRLTQHIEEVEGQVTQEGHFTIDEKSRQVELNEAGHQFIEEMLAQAGLLAEGESLYS 328
            LIP L +  +E   +   EG ++IDEK++QV   E G + +E +L + G+LAEG+SLYS
Sbjct: 241 TLIPSLIRQDKEDSEEYVGEGDYSIDEKAKQVHFTERGQEKVENLLIERGMLAEGDSLYS 300

Query: 329 AHNLGLLTHVYAGLRAHKLFHRNVEYIVQDGQVLLIDEHTGRTMPGRRLSEGLHQAIEAK 388
           A N+ LL HV A LRAH LF R+V+YIVQDG+V+++DEHTGRTMPGRR SEGLHQA+EAK
Sbjct: 301 AANISLLHHVNAALRAHTLFERDVDYIVQDGEVIIVDEHTGRTMPGRRWSEGLHQAVEAK 360

Query: 389 ENLNIQAESQTLASTTFQNYFRLYTKLSGMTGTADTEAFEFQSIYGLNVMVIPPNKPLAR 448
           E + IQ E+QTLAS TFQNYFRLY KL+GMTGTADTEAFEFQ IYGL+ +V+P N+P+ R
Sbjct: 361 EGVRIQNENQTLASITFQNYFRLYEKLAGMTGTADTEAFEFQHIYGLDTVVVPTNRPMVR 420

Query: 449 KDYNDLVYLTADEKYAAIIADIKESMKLGRPVLVGTATIETSEHMSNLLKKEGIDHKVLN 508
           KD  DLVYLTA+EKY AII DIK+  + G+PVLVGT +IE SE ++ L+ KE I H+VLN
Sbjct: 421 KDMADLVYLTANEKYQAIIKDIKDCRERGQPVLVGTVSIEQSELLARLMVKEKIPHQVLN 480

Query: 509 AKYHEKEAEIIAQAGAPGALTIATNMAGRGTDILLGGNWEAEVAALENPTAEQIAQIKAD 568
           AK+HEKEAEI+AQAG  GA+TIATNMAGRGTDI+LGGNW  E+ ALENPTAEQ A+IKAD
Sbjct: 481 AKFHEKEAEIVAQAGRTGAVTIATNMAGRGTDIVLGGNWNMEIEALENPTAEQKAKIKAD 540

Query: 569 WQKRHQQVIETGGLHVIASERHESRRIDNQLRGRSGRQGDPGSSRFYLSLEDSLMRIFAS 628
           WQ+RH  V+  GGLH++ +ERHESRRIDNQLRGR+GRQGD GSSRFYLS+EDSLMRIFAS
Sbjct: 541 WQERHDAVVAAGGLHILGTERHESRRIDNQLRGRAGRQGDAGSSRFYLSMEDSLMRIFAS 600

Query: 629 DRVKNFMKALGMQSGEAIEHRMVTNAIEKAQRKVEGRNFDIRKQLLEYDDVANEQRKVIY 688
           DRV   MK LGM+ GEAIEH  V+ AIE AQRKVE RNFDIRKQLLE+DDVAN+QR+V+Y
Sbjct: 601 DRVSGMMKKLGMEEGEAIEHPWVSRAIENAQRKVEARNFDIRKQLLEFDDVANDQRQVVY 660

Query: 689 HMRNSLLAAENIGDTIVEFRKEVLDATISQHIPPQSLPEQWDVAGLEASLASDFAIKLPI 748
             RN L+ AE+I DTI   + +V+ A I Q+IPPQS+ E WDV GLE  L  +F +KLPI
Sbjct: 661 AQRNELMDAESIEDTIKNIQDDVISAVIDQYIPPQSVEELWDVPGLEQRLQQEFMLKLPI 720

Query: 749 RQWLDEDDHLYEETLREKLLSEITTAYTEKEDQAGLEALRTFEKQILLRVLDDLWKDHLS 808
           ++WLD++D L+EETLRE++++  + AY  KE+  G   LR FEK ++L+ LD LWK+HL+
Sbjct: 721 QEWLDKEDDLHEETLRERIITSWSDAYKAKEEMVGAPVLRQFEKAVMLQTLDGLWKEHLA 780

Query: 809 TMDHLRHGIHLRGYAQKNPKQEYKRESFSLFQELLESIKRDTIRVLSHVQVRREDPAEEE 868
            MDHLR GIHLRGYAQKNPKQEYKRESF LFQ+LL ++K D I VLS VQV+ +   EE 
Sbjct: 781 AMDHLRQGIHLRGYAQKNPKQEYKRESFELFQQLLSTLKHDVISVLSKVQVQAQSDVEEM 840

Query: 869 ARLRREAEELASRMQFQHAAAPGLGSEQLSEEGAEVAVASAP-VRNDQKLGRNEPCWCGS 927
              RRE E+   +  +QHAAA  L      ++G++  +A  P +R+  K+GRN+PC CGS
Sbjct: 841 EARRRE-EDAKIQRDYQHAAAEALVG---GDDGSDEMMAHTPMIRDGDKVGRNDPCPCGS 896

Query: 928 GKKFKHCHGQI 938
           G+K+K CHG++
Sbjct: 897 GRKYKQCHGKL 907