Pairwise Alignments

Query, 318 a.a., D-alanine--D-alanine ligase B from Pseudomonas putida KT2440

Subject, 1076 a.a., carbamoyl-phosphate synthase large chain from Vibrio cholerae E7946 ATCC 55056

 Score = 55.1 bits (131), Expect = 8e-12
 Identities = 39/135 (28%), Positives = 71/135 (52%), Gaps = 4/135 (2%)

Query: 59  DDLLARLQSEKIDRAFIILHGRGGEDGSMQGLLECLGIPYTGSGILASALAMDKLRTKQV 118
           +D+LA ++ EK  +  I+ +G G     +   LE  G+P  G+   A   A D+ R +Q 
Sbjct: 623 EDVLAIVRVEK-PKGVIVQYG-GQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQQA 680

Query: 119 WQSLGIPTPRHAVLASESDCLQASTELGFPLIVKPAHEGSSIGMAKVNSTQELVAAWQDA 178
            Q LG+  P +A + +    ++ S E+GFPL+V+P++      M  V   Q+L   + +A
Sbjct: 681 VQRLGLKQPDNATVTAIEQAIEKSREIGFPLVVRPSYVLGGRAMEIVYDEQDLRRYFNEA 740

Query: 179 AKY--DSQVLVEQWI 191
                +S VL+++++
Sbjct: 741 VSVSNESPVLLDRFL 755



 Score = 36.6 bits (83), Expect = 3e-06
 Identities = 29/117 (24%), Positives = 53/117 (45%), Gaps = 3/117 (2%)

Query: 89  GLLECLGIPYTGSGILASALAMDKLRTKQVWQSLGIPTPRHAVLASESDCLQASTELGFP 148
           G+L   G+   G+   A   A D+ R  +  +S+G+  PR     S  +  +    +GFP
Sbjct: 106 GVLAEFGVEMIGATADAIDKAEDRSRFDKAMKSIGLECPRADTAKSMEEAYKVLDMVGFP 165

Query: 149 LIVKPAHE--GSSIGMA-KVNSTQELVAAWQDAAKYDSQVLVEQWIHGPEFTIAVLR 202
            I++P+    GS  G+A      +E+     D +  +  ++ E  I   E+ + V+R
Sbjct: 166 CIIRPSFTMGGSGGGIAYNREEFEEICTRGLDLSPTNELLIDESLIGWKEYEMEVVR 222