Pairwise Alignments

Query, 318 a.a., D-alanine--D-alanine ligase B from Pseudomonas putida KT2440

Subject, 354 a.a., D-alanine--D-alanine ligase family protein from Synechocystis sp000284455 PCC 6803

 Score =  155 bits (391), Expect = 2e-42
 Identities = 111/340 (32%), Positives = 165/340 (48%), Gaps = 48/340 (14%)

Query: 19  RVAVLYGGKSAEREVSLKSGAAVIDALST--------------------AGVDVV----- 53
           RV +L+GG S E EVS+KS  A+  AL++                     G DV      
Sbjct: 2   RVGLLFGGCSGEHEVSIKSAQAIAKALASDDNQTKYQVSPFYIQKNGVWLGPDVSQQVLD 61

Query: 54  -AIDVGDDLLARLQ-------SEKIDRAFIILHGRGGEDGSMQGLLECLGIPYTGSGILA 105
             +  GD  +   Q       + +++  F ILHG  GEDG++QGL   + +PY GSG+L 
Sbjct: 62  QGVPWGDQPVTAGQRWQFPPEAARMEVWFPILHGPNGEDGTVQGLFSLMQVPYVGSGVLG 121

Query: 106 SALAMDKLRTKQVWQSLGIPTPRHAVL----------ASESDCLQASTELGFPLIVKPAH 155
           S + MDKL  K V++  G+P   +  +             + C +   ++G+P  VKPA+
Sbjct: 122 SCVGMDKLAMKMVFERAGLPQVNYMGVERGEIWSNPCVFPALCEKIEAQVGYPCFVKPAN 181

Query: 156 EGSSIGMAKVNSTQELVAAWQDAAKYDSQVLVEQWIHG-PEFTIAVLRGQVLPPIALGT- 213
            GSS+G+AKV +  EL AA  +AA YD +++VE  +    E   AVL  +      +G  
Sbjct: 182 LGSSVGIAKVRNRSELEAALDNAASYDRRIIVEAGLTDIREVECAVLGNENPQASVVGEI 241

Query: 214 --PHVFYDYDAKYIVNDTQYRIPCGLDSVKEQELIDLTARACDAIGIEGWGRLDVM-QDE 270
                FYDY+ KY    +Q  IP  L      ++  +  +A  A+   G GRLD   Q  
Sbjct: 242 TYDSDFYDYETKYTDGRSQMHIPANLPKAVVNQIQTMAIQAFKAVDAAGLGRLDFFYQPT 301

Query: 271 QGRFWLLEVNTAPGMTDHSLVPMAARAAGLDFQQLVLAIL 310
            G+  + E+NT PG T  S+ P   RA+G++F  LV  +L
Sbjct: 302 TGQIVINEINTLPGFTAFSMYPELWRASGVEFPSLVDRLL 341