Pairwise Alignments

Query, 318 a.a., D-alanine--D-alanine ligase B from Pseudomonas putida KT2440

Subject, 308 a.a., D-alanine--D-alanine ligase from Sinorhizobium meliloti 1021

 Score =  190 bits (482), Expect = 4e-53
 Identities = 128/310 (41%), Positives = 170/310 (54%), Gaps = 19/310 (6%)

Query: 20  VAVLYGGKSAEREVSLKSGAAVIDALSTAGVDVVAIDVGDDLLARLQSEKIDRAFIILHG 79
           VAVL GG S+ER VSL SG A  DAL   G  V  +DVG D+ A LQ  + D  F  LHG
Sbjct: 6   VAVLLGGFSSERPVSLSSGTACADALEAEGYRVTRVDVGRDVAAVLQELRPDVVFNALHG 65

Query: 80  RGGEDGSMQGLLECLGIPYTGSGILASALAMDKLRTKQVWQSLGIPTPRHAVLASESDCL 139
             GEDG++QG+LE L IPYT SG+LASALAMDK + K V ++ GIP     V+   S   
Sbjct: 66  PFGEDGTIQGILEYLEIPYTHSGVLASALAMDKDQAKHVAKAAGIPVAEALVMDRRSFGN 125

Query: 140 QASTELGFPLIVKPAHEGSSIGMAKVNSTQE------LVAAWQDAAKYDSQVLVEQWIHG 193
           Q   +   P +VKP  EGSS G+  V   Q         + W    +Y  +V+VE++I G
Sbjct: 126 QHPMKP--PYVVKPVREGSSFGVVIVKEDQSHPPQVITSSEW----RYGDRVMVERYIAG 179

Query: 194 PEFTIAVLRGQVLPPIALGTP--HVFYDYDAKYIVNDTQYRIPCGLDSVKEQELIDLTAR 251
            EFT  V+ G V   +    P  H FYDYD+KY+   +++ IP  +     Q++  L  +
Sbjct: 180 REFTCGVM-GDVALGVTEIIPQGHAFYDYDSKYVKGGSKHVIPAQISPNIYQKIQTLALK 238

Query: 252 ACDAIGIEGWGRLDVMQDE----QGRFWLLEVNTAPGMTDHSLVPMAARAAGLDFQQLVL 307
           A  AIG  G  R D   D+    +G    LE+NT PGMT  SLVP  A+ AGL F + + 
Sbjct: 239 AHQAIGCRGVSRSDFRFDDRGDGEGELIWLEINTQPGMTPTSLVPEMAQHAGLQFGEFLR 298

Query: 308 AILAESVATR 317
            ++ ++   R
Sbjct: 299 WMVEDASCLR 308