Pairwise Alignments

Query, 318 a.a., D-alanine--D-alanine ligase B from Pseudomonas putida KT2440

Subject, 1081 a.a., carbamoyl-phosphate synthase large subunit from Methanococcus maripaludis S2

 Score = 51.2 bits (121), Expect = 1e-10
 Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 10/137 (7%)

Query: 76  ILHGRGGEDG-------SMQGLLECLGIPYTGSGILASALAMDKLRTKQVWQSLGIPTPR 128
           IL   GG+ G       S +G+LE  G+   GS       + D+    +  + +  P  +
Sbjct: 85  ILPTMGGQTGLNLAMELSKRGILEKHGVELLGSTESVIETSEDRDLFNKAMEEINQPIAK 144

Query: 129 HAVLASESDCLQASTELGFPLIVKPAHEGSSIGMAKVNSTQELVAAWQDAAKYD--SQVL 186
            A + S  + + A+ ELG+P IV+PA      G    N+ +EL+   +   KY    QVL
Sbjct: 145 SAAVHSVEEAIGATKELGYPAIVRPAFTLGGTGGGIANNEEELIEITKKGLKYSMIKQVL 204

Query: 187 VEQWIHG-PEFTIAVLR 202
           ++Q + G  E+   V+R
Sbjct: 205 IDQSLLGWKEYEYEVMR 221



 Score = 38.1 bits (87), Expect = 1e-06
 Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 2/99 (2%)

Query: 95  GIPYTGSGILASALAMDKLRTKQVWQSLGIPTPRHAVLASESDCLQASTELGFPLIVKPA 154
           G+   G+   +  LA D+ +   V + L IP    A   SE   L+    +G+P +V+P+
Sbjct: 666 GVNILGTSPQSIDLAEDRDQFIHVLEKLKIPQADGATAFSEEQALKVVERIGYPALVRPS 725

Query: 155 HEGSSIGMAKVNSTQELVAAWQDAAKY--DSQVLVEQWI 191
           +      M  V +T++L    ++A K   D  +L+++++
Sbjct: 726 YVLGGRAMQIVYNTEDLKDYMREAVKVSSDHPILIDKFL 764