Pairwise Alignments

Query, 450 a.a., UDP-N-acetylmuramoylalanine--D-glutamate ligase from Pseudomonas putida KT2440

Subject, 453 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Vibrio cholerae E7946 ATCC 55056

 Score = 70.5 bits (171), Expect = 1e-16
 Identities = 90/355 (25%), Positives = 145/355 (40%), Gaps = 41/355 (11%)

Query: 110 KAPIVAISGSNAKSTVTTLVGEMAAKAGKRVAVGGN----LGTPALDLLADDIE--LYVL 163
           + P VAI+GS  K+TV  +V  + ++ G+ +   GN    +G P L LL    E    V+
Sbjct: 99  QTPTVAITGSCGKTTVKEMVASILSQKGQVLYTQGNFNNDIGVP-LTLLRSTTEDDYAVI 157

Query: 164 ELSSFQL----ETTDQLNAEVATVLNISEDHMDRYSGLPAYHLAKHRIFRGARQ---VVV 216
           EL +  +     TT  +  +VA V N++  H++ +  +     AK  I++G +     +V
Sbjct: 158 ELGANHVGEIAYTTALVKPDVALVNNVAAAHLEGFGSMDGVKRAKGEIYQGLQAGAVAIV 217

Query: 217 NRQDALSRPLPVEGRPCWTFGLNPPDFKAFGLREVDGEKY--------LAFEFQTLMP-- 266
           N        L   G   W   L     K F   + + + Y        L     TL+   
Sbjct: 218 N--------LDSNGGDYWKAVLADKTVKTFSATDHNADFYPRDVRLNALGIASFTLVTPV 269

Query: 267 ---ARELKVRGAHNQSNALAALALGHAAGLPFEPMLEALREFGGLAHRCQWVRERNGVNW 323
                EL + G HN +NALAA AL    G     + + L     +  R    + R+ +  
Sbjct: 270 GEVGVELGIMGQHNVANALAAAALSLEMGASLAEIGQGLAHLSKVKGRVDMAQLRDDITL 329

Query: 324 YDDSKATNVGAALAAIEGLGADIEGKLVLIAGGDGKGAEFTALREPVKRFC-----RAVV 378
            DDS   +V A  AA+E LG+    + +++      G E  AL + V           V+
Sbjct: 330 IDDSYNASVPAMKAAVELLGSFSAVRWLILGNMAELGDESLALHQQVGEHAAPFGFEFVL 389

Query: 379 LLGRDAERLAEALGDAVPLVRVKTLDDAVQQCAELAQAGDAVLLSPACASLDMFK 433
             G+DA+ +++ L         + +   ++Q  E  Q    VLL     S  M K
Sbjct: 390 TYGKDAKVISD-LCQGHHFATHQDMMTFIEQHIEQQQGRTQVLLVKGANSAGMSK 443