Pairwise Alignments

Query, 450 a.a., UDP-N-acetylmuramoylalanine--D-glutamate ligase from Pseudomonas putida KT2440

Subject, 443 a.a., UDP-N-acetylmuramoylalanine--D-glutamate ligase (RefSeq) from Shewanella loihica PV-4

 Score =  377 bits (969), Expect = e-109
 Identities = 214/448 (47%), Positives = 296/448 (66%), Gaps = 14/448 (3%)

Query: 6   IASDQFRIVVGLGKSGMSLVRFLASRGIAFAVADTREQPPELETLRRDYPQVEVRCGELD 65
           +AS    IV+GLG +G+S+VR+L  +GI   V D+RE PP  ETL +++P+V +  G  D
Sbjct: 1   MASQYTHIVLGLGATGLSVVRYLIKQGITPLVMDSRENPPGRETLSQEFPEVLLLTGGFD 60

Query: 66  VDFLCRANELYVSPGLALATPALQQAAARGVKLSGDIELFAR---HAKAPIVAISGSNAK 122
             +L +A+++ VSPG+ L T  ++ A   G+ + GD+ELFAR      A ++ I+GSN K
Sbjct: 61  CRYLVQASQIVVSPGIPLDTAEVRAAVDMGIDIVGDVELFARALADRPACVIGITGSNGK 120

Query: 123 STVTTLVGEMAAKAGKRVAVGGNLGTPALDLLADDIELYVLELSSFQLETTDQLNAEVAT 182
           STVTTLVGEMAAKAG +VAVGGN+G P LDLL  D EL+VLELSSFQLETT  LN   AT
Sbjct: 121 STVTTLVGEMAAKAGLKVAVGGNIGVPVLDLLDGDHELFVLELSSFQLETTSSLNCISAT 180

Query: 183 VLNISEDHMDRYSGLPAYHLAKHRIFRGARQVVVNRQDALSRPLPVEGRPCWTFGLNPPD 242
            LNISEDHMDRYS L +Y  AK R++   +  + NR D L+RP     +   +FGL+ P+
Sbjct: 181 CLNISEDHMDRYSDLESYRQAKLRLYDQTKLAIFNRDDLLTRPNEPMNQN--SFGLSLPE 238

Query: 243 FKAFGLREVDGEKYLAFEFQTLMPARELKVRGAHNQSNALAALALGHAAGLPFEPMLEAL 302
              +G+        L       +   ++ + G+HNQ+N L A+AL  +AG+    M+E  
Sbjct: 239 GDEWGV----NHGVLVHGTTEYVAGAQVSLVGSHNQANLLVAMALADSAGVDKAAMVEVA 294

Query: 303 REFGGLAHRCQWVRERNGVNWYDDSKATNVGAALAAIEGLGADIEGKLVLIAGGDGKGAE 362
           ++F GLAHRC+ V +  GV++ +DSKATNVGA +AA++GL +D EG+++LIAGGDGKGA+
Sbjct: 295 KQFKGLAHRCELVGKHQGVSYVNDSKATNVGATIAALQGL-SDHEGQIILIAGGDGKGAD 353

Query: 363 FTALREPVKRFCRAVVLLGRDAERLAEALGDAVPLVRVKTLDDAVQQCAELAQAGDAVLL 422
           F+ LR  +    + V+ LG+D +R+AE    A   +RV+++ +AV Q A+LA+ GD VLL
Sbjct: 354 FSTLRGALLGVGQ-VITLGKDGDRIAEQFDGA---IRVESMQEAVAQAAQLAKPGDLVLL 409

Query: 423 SPACASLDMFKNFEERGRLFAQAAGGLA 450
           SPACASLDM+ NF  RG  F      LA
Sbjct: 410 SPACASLDMYANFMARGDDFRAQVEALA 437