Pairwise Alignments

Query, 450 a.a., UDP-N-acetylmuramoylalanine--D-glutamate ligase from Pseudomonas putida KT2440

Subject, 464 a.a., UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase from Marinobacter adhaerens HP15

 Score = 56.6 bits (135), Expect = 2e-12
 Identities = 63/264 (23%), Positives = 113/264 (42%), Gaps = 32/264 (12%)

Query: 113 IVAISGSNAKSTVTTLVGEMAAKAGKRVA--VGGNLGTPALDLLADDIELYVLELSSFQL 170
           ++A++G++ K+T T+++  +  +AG      VGG      +     + + +V+E   +  
Sbjct: 105 VMAVAGTHGKTTTTSMLLWILDQAGFEPGYLVGGVPRDFPVSARLGNSDFFVIEADEYDS 164

Query: 171 ETTDQLNAEV------ATVLNISEDHMDRYSGLPAYHLAKHRIFRGARQVVVNRQDALSR 224
              D+ +  V        + N+  DH D +  + A     H + R      V  Q  + R
Sbjct: 165 AFFDKRSKFVHYRPHTLILNNLEFDHADIFENVEAIERQFHHLVR-----TVPSQGLIIR 219

Query: 225 PLPVEGR-------PCWT------FGLNPP---DFKAFGLREVDGEKYLAFEFQTLMPAR 268
           P  V+G         CW+       G   P   D++A  L E DG ++L    +  +   
Sbjct: 220 PA-VDGHLDNALALGCWSPVQDTAIGSETPRMSDWRAELLSE-DGSRFLVIHHEQPVATL 277

Query: 269 ELKVRGAHNQSNALAALALGHAAGLPFEPMLEALREFGGLAHRCQWVRERNGVNWYDDSK 328
           +    G HN  NAL+A+A     G+  +  + AL  F G+  R + + + +GV  YDD  
Sbjct: 278 KWDQTGLHNVRNALSAIAAARHVGVTPDHAVAALCRFSGVKRRMELLADIDGVRVYDDF- 336

Query: 329 ATNVGAALAAIEGLGADIEGKLVL 352
           A +  A    +EGL   +  + +L
Sbjct: 337 AHHPTAIATTLEGLRNQVGDEPIL 360