Pairwise Alignments

Query, 455 a.a., D-alanyl-D-alanine-adding enzyme from Pseudomonas putida KT2440

Subject, 485 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Rhodopseudomonas palustris CGA009

 Score =  100 bits (248), Expect = 1e-25
 Identities = 119/450 (26%), Positives = 187/450 (41%), Gaps = 64/450 (14%)

Query: 22  DATFTGVSIDSRSVSAGQLFVALAGPRFDGHDYLADVKAKGAVAALVE-REVADVDLPQL 80
           D T  G+++DSR+V  G LF ALAG + DG  ++A   A GAVA   E R   D+ +P +
Sbjct: 19  DLTIGGLAVDSRAVKPGDLFFALAGAKTDGARFVAAAVAAGAVAVAGEHRPEGDLSVPFV 78

Query: 81  QVADCRLALGQLGALNRAAFDKPVVAITGSSGKTTVKEM----------LASILRTRGLV 130
           Q+++ RLAL Q  A       + + A+TG+SGKT+V              A+ + T GLV
Sbjct: 79  QLSNARLALAQAAARFYPRQPEVIAAVTGTSGKTSVAAFTRQIWQRLGHAAASIGTIGLV 138

Query: 131 HATR---GNLN--NDLGAPLTLLEIAPEHSAAVIELGASRIGEIRYTVGLTQPQVVIINN 185
             TR   G+L   + +    +L EIA E     + L AS  G  ++ +   +       N
Sbjct: 139 TPTRSVYGSLTTPDPIALHRSLDEIARE-GITHLALEASSHGLDQFRLDGVRVAAGGFTN 197

Query: 186 AGTAHVGEFGGPDKIVEAKGEILEGLGQ-GGIAILNLDD--KAFDIWKARAGAHKVVSFA 242
               H+         + AK  +   L Q GG A+++ D    A  I  A A   ++++  
Sbjct: 198 LSRDHMDYHPTVAHYLNAKLRLFRNLVQDGGAAVISADHDCSAQVIEAAGARGLRLITIG 257

Query: 243 RS-NPKADFHASDIGRDARGCPSFTLHGAGETVAVQLNVLGEHNVSNALAAAAAAHAVGL 301
           R+ +P A     D   +       T+  AG+   ++L ++GE  + NAL AA      G 
Sbjct: 258 RNGDPGAGIKLIDAAVEG-FAQQLTVEHAGKRHRIKLPLVGEFQIENALVAAGLVIGTGG 316

Query: 302 SLSGIAAGLAAVQPVKGRTVAQIAPNGVRVIDDSYNANPTSMCAAIDILAGFSGRTVLVL 361
             +   A L  ++   GR     A NG  V  D Y   P ++   +  L  ++ R ++V+
Sbjct: 317 DAAASFAALEHLEGAPGRLDLVGARNGAPVFVD-YAHKPDALAKTLQALRPYAKRKLVVV 375

Query: 362 GDIGELGQWAEEGHRQVGDYARGKVDALYAVGSNMTHAVKAFGANGRHFATQAELIDAVS 421
                                                    FGA G   + +  L+ A++
Sbjct: 376 -----------------------------------------FGAGGDRDSGKRPLMGAIA 394

Query: 422 AENASDTTILIKGSRSAAMENVVAALCGAS 451
           AENA    I     RS     + AA+  A+
Sbjct: 395 AENADVVIITDDNPRSEDPATIRAAILAAA 424