Pairwise Alignments

Query, 455 a.a., D-alanyl-D-alanine-adding enzyme from Pseudomonas putida KT2440

Subject, 428 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Parabacteroides merdae CL09T00C40

 Score =  210 bits (535), Expect = 6e-59
 Identities = 145/430 (33%), Positives = 217/430 (50%), Gaps = 27/430 (6%)

Query: 28  VSIDSRSVSAGQLFVALAGPRFDGHDYLADVKAKGAVAALVEREVADVDLPQLQVADCRL 87
           V+ DSR+   G +F AL G +FDG+ Y     A G V A+++     +    + V +   
Sbjct: 16  VTTDSRNCPRGSIFFALKGDKFDGNQYAEKALASGCVYAVIDNPDYFIGERTILVDNVLT 75

Query: 88  ALGQLGALNRAAFDKPVVAITGSSGKTTVKEMLASILRTRGLVHATRGNLNNDLGAPLTL 147
            L QL   +R     P++ ITG++GKTT KE+LAS+L T+  +  T GNLNN +G PLTL
Sbjct: 76  TLQQLAHRHRKVIGCPIIGITGTNGKTTTKELLASVLSTKYNLLYTEGNLNNHIGVPLTL 135

Query: 148 LEIAPEHSAAVIELGASRIGEIRYTVGLTQPQVVIINNAGTAHVGEFGGPDKIVEAKGEI 207
           L +  +H  AVIE+GAS  G+I+  V + QP   II N G AH+  FG  + +++ KGE+
Sbjct: 136 LRLTHDHEMAVIEMGASHPGDIKELVDIAQPNYGIITNVGRAHLEGFGSFEGVIKTKGEL 195

Query: 208 LEGLGQ-GGIAILNLDDKAFDIWKARAGAHKVVSFARSNPKADFHASDIGRDARGCP--- 263
            + + +  G   +N D+K     K  A   + V++           SD    A GC    
Sbjct: 196 YDYMRRTKGKIFINQDNKYL---KEIANGIEQVTY----------GSDETAFAWGCVVSC 242

Query: 264 ----SFTLHGAGETVAVQLNVLGEHNVSNALAAAAAAHAVGLSLSGIAAGLAAVQPVKGR 319
               +F     G+   V+ +++G +N+ NAL A A      +    I+  + A +P   R
Sbjct: 243 NPYLTFEWRQQGKIHTVETHLIGSYNLDNALVAVAVGRFFKIPAERISRAITAYEPTNNR 302

Query: 320 TVAQIAPNGVRVIDDSYNANPTSMCAAIDILAGFS-GRTVLVLGDIGELGQWAEEGHRQ- 377
           +  +   N   +I D+YNANP+SM  A+D  A        L+LGD+ ELG  ++E H + 
Sbjct: 303 SQLKKTENNELII-DAYNANPSSMKVALDNFATMPVSPKALILGDMRELGPTSDELHTEV 361

Query: 378 VGDYARGKVDALYAVGSNMTHAVKAFGANGRHFATQAELIDAVSAENASDTTILIKGSRS 437
           V     G  D ++  G    H  KA G +   +AT  ELI+A+         +LIKGS  
Sbjct: 362 VARIKEGNYDKVFLCGE---HFQKAAGKDFTTYATTEELIEALRKNPLEGYHVLIKGSHG 418

Query: 438 AAMENVVAAL 447
            A+E VV  L
Sbjct: 419 MALERVVEVL 428