Pairwise Alignments

Query, 315 a.a., Ribosomal RNA small subunit methyltransferase H from Pseudomonas putida KT2440

Subject, 308 a.a., 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH from Parabacteroides merdae CL09T00C40

 Score =  202 bits (515), Expect = 6e-57
 Identities = 126/305 (41%), Positives = 177/305 (58%), Gaps = 11/305 (3%)

Query: 9   HITVLLDEAVEALALRADGCYLDGTFGRGGHSRLILSKLGPQGRLLGFDKDPQAIATGQA 68
           H+ V+L E++E L ++  G Y+D TFG GGHSR IL++L  +G L GFD+D  A     A
Sbjct: 9   HVPVMLHESLEGLDIQPSGVYVDVTFGGGGHSREILNRLNDEGELYGFDQDADAEKNIPA 68

Query: 69  LAAEDGRFVIVQRSFAELGAEVAARGLHGKVSGVLLDLGVSSPQLDDPERGFSFLNDGPL 128
               D RFV V+ +F  L   +   G+ G+V G+L DLGVSS   DD +RGFSF  DG L
Sbjct: 69  ----DSRFVFVRSNFRYLYNFMRYHGVAGEVDGLLADLGVSSHHFDDKDRGFSFRFDGAL 124

Query: 129 DMRMNPDQGVSAAEFIATAPVEEIARVFKEYGEERFAGRMARAVVERREKQPFTRTADLA 188
           DMRMN   G +AA+ + T   E++A +F  YGE + A ++A  +V  RE +     AD  
Sbjct: 125 DMRMNTRAGQTAADIVNTYTEEQLADLFYLYGELKVARKLASVLVRSREIKKIETIADFL 184

Query: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAALDALEVGGRLAVISFHSL 248
           EV+K      +K K    + FQ LRI VN+E+  L   L+  L  L+ GGRL VI++HSL
Sbjct: 185 EVIKPFT-GKDKEKKFLAQVFQALRIEVNDEMRALREMLQQTLQVLKPGGRLVVITYHSL 243

Query: 249 EDRIVKLFMRK-LVKGEADNLPRNLPVQHKVFEPKIKLIGKAQFASEAELKANPRSRSAV 307
           EDR+VK F++    +G+A+           +  P   +  K    S+ E++ NPRSRSA 
Sbjct: 244 EDRLVKNFLKTGNFEGKAEQ-----DFFGNIRSPFRLVNNKVIVPSDEEIERNPRSRSAK 298

Query: 308 MRVAE 312
           +R+AE
Sbjct: 299 LRIAE 303