Pairwise Alignments

Query, 306 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 332 a.a., Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain from Pseudomonas stutzeri RCH2

 Score =  154 bits (390), Expect = 2e-42
 Identities = 79/223 (35%), Positives = 124/223 (55%)

Query: 80  WLREQHARGAVLCAEASGVFWLAESGLLDGKEATTYWRFFNSFAERFPQIRLNQDKHLTD 139
           WL + H  G  L +  +G F LAE+GLLDG+  TT+W    +  ERFP ++++ D+ + D
Sbjct: 100 WLGQCHQAGVTLGSVCAGAFLLAETGLLDGRTVTTHWGLAQALRERFPNVQVDADRMIVD 159

Query: 140 ADNIYCAGGATSACDLYIYLIERFCGANVARAVSRDILYEVQRNYTPGRMGFGGQKLHQD 199
             +I  AGG  +  DL + L+ER  G  +A   +R ++ ++ R        F  +  H D
Sbjct: 160 DGDIITAGGLMAWTDLGLALVERLLGPTIASETARYLVIDLTRQSQRYFSSFAPRLDHGD 219

Query: 200 LIILQIQHWLEEHFADKFRFEDVARNHGMSIRNFMRRFQGATGDKPLHYLQRLRIETAKG 259
             +L++Q WL+   A       +A   GM  R F+RRF+ ATG KP  Y Q+LR+  A+ 
Sbjct: 220 EAVLRVQRWLQSQSASAVPVAAMAAQAGMGERTFLRRFRAATGLKPTEYCQQLRVGKARE 279

Query: 260 LLSSTRKSIKTISYEVGYDDASFFARLFRQHTELSPNQYRQQF 302
           LL  T + I+ +++ VGY D   F ++F++   LSP  YR++F
Sbjct: 280 LLELTNRGIEQVAWAVGYQDPGAFRKVFQRLVGLSPGDYRRRF 322