Pairwise Alignments

Query, 402 a.a., quality control serine endoprotease DegS from Pseudomonas putida KT2440

Subject, 491 a.a., Peptidase S1C, Do (NCBI) from Rhodospirillum rubrum S1H

 Score =  289 bits (739), Expect = 1e-82
 Identities = 159/331 (48%), Positives = 220/331 (66%), Gaps = 9/331 (2%)

Query: 69  VSYADAVTLAAPAVANLYTTKVVNKS-AHPLFEDPQFRRFFGDN--LPKQR-RWESSLGS 124
           +++A  V   APAV N+++ +V+ +S   P+F DP FRRF  +   L K R R + SLGS
Sbjct: 60  LTFAPVVRAVAPAVVNIFSQRVITESQVPPMFADPLFRRFLEERGMLGKPRERVQRSLGS 119

Query: 125 AVIMSPEGYLLTNNHVTSGADQIVVALKDGRETLARVIGSDPETDLAVLKIDLKN-LPAI 183
            VI+  EG ++TN HV +GA +I VAL D RE  A ++G DP  DLAVL+I     LP++
Sbjct: 120 GVILRSEGVVVTNAHVVNGASEITVALNDRREFPAELVGLDPRADLAVLRIKSDTPLPSL 179

Query: 184 TIGRSDTIHIGDVSLAIGNPFGVGQTVTMGIISATGRNQLGLNNYEDFIQTDAAINPGNS 243
            +   +   +GD+ LAIGNPFGVGQTVT GI+SA  R   G+++Y  FIQTDAAINPGNS
Sbjct: 180 ALADGEPPEVGDLVLAIGNPFGVGQTVTSGIVSAQARTTAGISDYRFFIQTDAAINPGNS 239

Query: 244 GGALVDANGNLIGINTAIFSKSGGSQGIGFAIPVKLALEVMKSIVEHGQVIRGWLGIEVQ 303
           GGALVD +G L+GINTAI+S+ GGS GIGFAIPV++   V++ I+E G+V   WLG + Q
Sbjct: 240 GGALVDLSGRLVGINTAIYSRDGGSVGIGFAIPVEMVRSVVEGILEDGKVRHPWLGADGQ 299

Query: 304 PLSQELAESFGMKDRP-GIVVAGIFREGPAAKAGLHLGDVILSINGEPAGDGRKSMNQVA 362
            ++ ELA   G+ DRP G+ +  + + GPAAKAGL  GDVIL+++G P  +G     ++A
Sbjct: 300 SVTTELASHMGL-DRPLGVAITDVAKGGPAAKAGLAEGDVILALDGRPVFEGETLRYRIA 358

Query: 363 RIKPNEKITIEVMRNGQQLKLIAEVGLRPPP 393
             +P +K+ + + R+G+   L   V L  PP
Sbjct: 359 THRPGDKVVLGIRRDGKDTTL--AVTLEAPP 387



 Score = 40.4 bits (93), Expect = 1e-07
 Identities = 28/87 (32%), Positives = 50/87 (57%), Gaps = 4/87 (4%)

Query: 299 GIEVQPLSQELAESFGM-KDRPGIVVAGIFREGPAAKAGLHLGDVILSINGEPAGDGRKS 357
           G EV  ++  LAE  G+ K   G+ V G+  +G AA+ G+  GD ++ +NG+ A D  + 
Sbjct: 405 GAEVSNMNPALAEELGLEKASRGVTVTGL-GDGVAARIGIRPGDRVIEVNGK-AIDAVRD 462

Query: 358 MNQVARIKPNEKITIEVMRNGQQLKLI 384
           + + A  KP+    + V R+G+ ++L+
Sbjct: 463 L-KAAISKPSRVWQVVVDRDGRAVRLV 488