Pairwise Alignments

Query, 402 a.a., quality control serine endoprotease DegS from Pseudomonas putida KT2440

Subject, 523 a.a., Do family serine endopeptidase from Rhodopseudomonas palustris CGA009

 Score =  240 bits (612), Expect = 8e-68
 Identities = 138/373 (36%), Positives = 206/373 (55%), Gaps = 18/373 (4%)

Query: 46  VGLPSQDVNLQQAPQTTRIMQGPVSYADAVTLAAPAVANLYTT---KVVNKSAHPLFEDP 102
           V L +   + Q+     +  Q PV +AD V    P+V ++      K+        F  P
Sbjct: 49  VDLIATPAHAQEVSANVQPAQQPVGFADIVDKVKPSVISVKVNIADKMAKNEDREDFSFP 108

Query: 103 Q-------FRRFFGDNLPKQRRWE-----SSLGSAVIMSPEGYLLTNNHVTSGADQIVVA 150
                   FRRF G+  P  R        +  GS   +S +GY +TNNHV  GAD++ V 
Sbjct: 109 PGSPMERFFRRFGGEMPPGLRGHRGGGMITGQGSGFFISADGYAVTNNHVVEGADKVEVT 168

Query: 151 LKDGRETLARVIGSDPETDLAVLKIDL-KNLPAITIGRSDTIHIGDVSLAIGNPFGVGQT 209
             DG+   A+VIG+DP TDLA++K++   + P   +       IGD  LA+GNPFG+G T
Sbjct: 169 TDDGKTYKAKVIGNDPRTDLALIKVEGGSSFPYAKLSEGKP-RIGDWVLAVGNPFGLGGT 227

Query: 210 VTMGIISATGRNQLGLNNYEDFIQTDAAINPGNSGGALVDANGNLIGINTAIFSKSGGSQ 269
           VT GI+SA GR+ +G   Y+DFIQ DA +N GNSGG   +  G ++G+NTAI+S SGGS 
Sbjct: 228 VTAGIVSAMGRD-IGNGPYDDFIQIDAPVNKGNSGGPAFNTAGEVVGVNTAIYSPSGGSI 286

Query: 270 GIGFAIPVKLALEVMKSIVEHGQVIRGWLGIEVQPLSQELAESFGMKDRPGIVVAGIFRE 329
           GI F+IP      V++ + + G V RGW+G++VQP++ E+A+S G+K   G +VA     
Sbjct: 287 GIAFSIPANTVKAVVEQLKDRGSVSRGWIGVQVQPVTPEIADSLGLKKAEGALVAEPQSN 346

Query: 330 GPAAKAGLHLGDVILSINGEPAGDGRKSMNQVARIKPNEKITIEVMRNGQQLKLIAEVGL 389
           GPAAKAG+  GDVI++++G    D R+    +    P   + + V   G++ +L   +G 
Sbjct: 347 GPAAKAGIESGDVIVAVDGTSVKDARELARTIGAFAPGHAVKLTVFHKGKERELTLTLGE 406

Query: 390 RPPPAPAASQEEK 402
            P    A++  ++
Sbjct: 407 LPNKIEASNNTDR 419



 Score = 33.1 bits (74), Expect = 2e-05
 Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 6/89 (6%)

Query: 298 LGIEVQPLSQELAESFGMKDRPGIVVAGIFREGPAAKAGLHLGDVILSINGEPAGDGRKS 357
           LG+ + P     A S     + G+VV  +  +G AA  G   GDVIL + G+        
Sbjct: 434 LGLTLAP-----ASSVAGAGKDGVVVTDVDPKGAAADRGFKEGDVILEVAGKNVSSPADV 488

Query: 358 MNQVARIKPNEKITIEV-MRNGQQLKLIA 385
            + +A  K   K ++ V +R+G   + +A
Sbjct: 489 RDVLATAKTENKNSVLVRVRSGGASRFVA 517