Pairwise Alignments

Query, 402 a.a., quality control serine endoprotease DegS from Pseudomonas putida KT2440

Subject, 465 a.a., protease DegQ from Phaeobacter inhibens DSM 17395

 Score =  233 bits (594), Expect = 9e-66
 Identities = 142/354 (40%), Positives = 203/354 (57%), Gaps = 9/354 (2%)

Query: 57  QAPQTTRIMQGP----VSYADAVTLAAPAVANLYTTKVVNKSAHPLFEDPQFRRFFGDNL 112
           QA   TR+ Q      + +A  V  AAPAV N+Y   V  +   P   DP F  FF    
Sbjct: 21  QALADTRVPQNQAEISLGFAPLVKEAAPAVVNIYAKIVHEQRRTPFMNDPFFDDFFRGLS 80

Query: 113 PKQRRWESSLGSAVIMSPEGYLLTNNHVTSGADQIVVALKDGRETLARVIGSDPETDLAV 172
             Q R ++SLGS VI+SP+G +++N HV   A  I V   D RE  A+V+ +D  +DLA+
Sbjct: 81  KPQPRVQNSLGSGVILSPDGIVVSNYHVVGMATDIRVVTTDRREYAAQVVLADQASDLAI 140

Query: 173 LKID-LKNLPAITIGRSDTIHIGDVSLAIGNPFGVGQTVTMGIISATGRNQLGLNN-YED 230
           L+++  ++LP + +  SD + +G+++LAIGNPFGVGQTV+ GI+S   R+          
Sbjct: 141 LQLEEAEDLPYLELRDSDGVEVGELALAIGNPFGVGQTVSSGIVSGLARSGAATGEGIGY 200

Query: 231 FIQTDAAINPGNSGGALVDANGNLIGINTAIFSKSGGSQGIGFAIPVKLALEVMKSIVEH 290
           FIQTDA INPGNSGGAL+D NG+LIGINT I ++SGGS GIGFAIP  L    M+   + 
Sbjct: 201 FIQTDAPINPGNSGGALIDVNGDLIGINTRIVTRSGGSNGIGFAIPANLVRAFMRQAHDG 260

Query: 291 GQVI-RGWLGIEVQPLSQELAESFGMKDRPGIVVAGIFREGPAAKAGLHLGDVILSINGE 349
            +   R W G+  QP+  +LA S GM    G+V++ +    P  KAG  +GDV+L + GE
Sbjct: 261 AEEFQRPWAGMMGQPVDADLAASLGMDLPEGMVISELHPASPFTKAGFEVGDVVLDVAGE 320

Query: 350 PAGDGRKSMNQVARIKPNEKITIEVMRNGQQLKLIAEVGLRP--PPAPAASQEE 401
                 + + +++     +   +  +R G++  L  E+ L P  PPA   S +E
Sbjct: 321 VVNSPSEMVFRMSVTGLGDTAEVTRLRAGEREVLTVEMMLAPDEPPANPLSLDE 374



 Score = 25.8 bits (55), Expect = 0.003
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 6/53 (11%)

Query: 333 AKAGLHLGDVILSINGEPAGDGRKSMNQVARIKPN--EKITIEVMRNGQQLKL 383
           ++ GL  GD+IL IN E      K+   V+ +  N    + +++ R GQ++ L
Sbjct: 413 SRVGLRAGDIILGINNEAI----KTPADVSEVLGNIGRWMKVDLNRQGQRVSL 461