Pairwise Alignments

Query, 402 a.a., quality control serine endoprotease DegS from Pseudomonas putida KT2440

Subject, 497 a.a., periplasmic serine protease, Do/DeqQ family from Dechlorosoma suillum PS

 Score =  234 bits (597), Expect = 4e-66
 Identities = 139/338 (41%), Positives = 200/338 (59%), Gaps = 9/338 (2%)

Query: 71  YADAVTLAAPAVANLYTTKVVNKS----AHPLFEDPQFRRFFG--DNLPKQRRWES-SLG 123
           ++  V     AV N+ T  +   S     +P      F R FG    +  Q+  ES  +G
Sbjct: 71  FSALVEQVGSAVVNISTVTLAKNSNVSGINPNDPFYDFLRRFGIAPGMGSQQPQESRGIG 130

Query: 124 SAVIMSPEGYLLTNNHVTSGADQIVVALKDGRETLARVIGSDPETDLAVLKIDLKNLPAI 183
           S  I+S +GY+LTN HV + AD++ V L D RE  A+V+G D  +D+A++KI   NLP +
Sbjct: 131 SGFIVSADGYVLTNAHVVADADEVAVKLTDKREFKAKVVGIDRRSDVALIKIAASNLPTV 190

Query: 184 TIGRSDTIHIGDVSLAIGNPFGVGQTVTMGIISATGRNQLGLNNYEDFIQTDAAINPGNS 243
            IG  D + +G+   AIG PFG   +VT GI+SA  R  L    Y  FIQTD AINPGNS
Sbjct: 191 RIGSPDRLKVGEWVAAIGAPFGFENSVTAGIVSAKSR-ALPDETYVPFIQTDVAINPGNS 249

Query: 244 GGALVDANGNLIGINTAIFSKSGGSQGIGFAIPVKLALEVMKSIVEHGQVIRGWLGIEVQ 303
           GG L +  G ++GIN+ I+S+SGG QGI FAIP+ +A++V   + + G+V RG LG+ +Q
Sbjct: 250 GGPLFNLKGEVVGINSQIYSRSGGYQGISFAIPIDVAMKVKDQLQKTGKVQRGRLGVTMQ 309

Query: 304 PLSQELAESFGMKDRPGIVVAGIFREGPAAKAGLHLGDVILSINGEPAGDGRKSMNQVAR 363
           P+++ELAESFG+    G +V G+ R  PA KAGL  GDVI++++G P  +      +V  
Sbjct: 310 PVTKELAESFGLAKPVGALVTGVDRSSPADKAGLQPGDVIIALDGVPIEEATDLPRKVGD 369

Query: 364 IKPNEKITIEVMRNGQQLKLIAEVGLRP-PPAPAASQE 400
             P  K+ + V+R+G++L+  A +   P   AP A  E
Sbjct: 370 SAPGTKLGLTVLRDGKRLEKQAVLAAMPSETAPQARGE 407



 Score = 45.1 bits (105), Expect = 5e-09
 Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 10/98 (10%)

Query: 250 ANGNLIGINTAIFSKSGGSQGIGFAIPVKLALEVMKSIVEHGQVIRGWLGIEVQPLSQEL 309
           A G  +G+      K    Q +  A+P + A +        G+V     G+ V+ LS+E 
Sbjct: 371 APGTKLGLTVLRDGKRLEKQAVLAAMPSETAPQARGESAGGGRV-----GLAVRSLSREE 425

Query: 310 AESFGMKDRPGIVVAGIFREGPAAKAGLHLGDVILSIN 347
           A + G     G+VV G+   GPAA+AGL  GDV+L++N
Sbjct: 426 AAALGSS---GVVVVGV--NGPAARAGLQEGDVVLAVN 458