Pairwise Alignments

Query, 402 a.a., quality control serine endoprotease DegS from Pseudomonas putida KT2440

Subject, 360 a.a., protease DegS (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  271 bits (692), Expect = 3e-77
 Identities = 161/365 (44%), Positives = 220/365 (60%), Gaps = 25/365 (6%)

Query: 21  LRYFGWPLLTGILIAMLIIQRFPQWVGLPSQDVNLQQAPQTTRIMQGPVSYADAVTLAAP 80
           L Y G  +L G+++A + +     +      +  LQ     T      +S+A AV  AAP
Sbjct: 7   LLYLGKAVLFGLIMAAMFLLVTHYFDNKSLGNSLLQNRGNNTV----ELSFAKAVRRAAP 62

Query: 81  AVANLYTTKVVNKSAHPLFEDPQFRRFFGDNLPKQRRWESSLGSAVIMSPEGYLLTNNHV 140
           AV N+Y+  +            Q R     +L         LGS VIMS EGY+LTN HV
Sbjct: 63  AVVNIYSLSI-----------DQSRPLNSGSL-------QGLGSGVIMSKEGYILTNYHV 104

Query: 141 TSGADQIVVALKDGRETLARVIGSDPETDLAVLKIDLKNLPAITIGRSDTIHIGDVSLAI 200
              AD+IVVAL+DGR+  + V+G DPETDL+VLKI+  NLP + +       +GDV LAI
Sbjct: 105 IKKADEIVVALQDGRKFTSEVVGFDPETDLSVLKIEGDNLPTVPVNLDSPPQVGDVVLAI 164

Query: 201 GNPFGVGQTVTMGIISATGRNQLGLNNYEDFIQTDAAINPGNSGGALVDANGNLIGINTA 260
           GNP+ +GQT+T GIISATGRN L  + Y DF+QTDAAIN GNSGGAL+D NG+LIGINTA
Sbjct: 165 GNPYNLGQTITQGIISATGRNGLS-SGYLDFLQTDAAINAGNSGGALIDTNGSLIGINTA 223

Query: 261 IF--SKSGGSQGIGFAIPVKLALEVMKSIVEHGQVIRGWLGIEVQPLSQELAESFGMKDR 318
            F     GG  GI FAIP+KLA  +M  ++++G+VIRG LGI  +P++  +A+   + D 
Sbjct: 224 AFQVGGEGGGHGINFAIPIKLAHSIMGKLIKNGRVIRGALGISGEPINPVVAQILNLPDL 283

Query: 319 PGIVVAGIFREGPAAKAGLHLGDVILSINGEPAGDGRKSMNQVARIKPNEKITIEVMRNG 378
            G++V GI   GPAA+A L   DVI+  +GE        M+++A   P +K+ + V+R G
Sbjct: 284 RGVLVTGIDPNGPAARAQLLPRDVIIKYDGEDVPGVEMLMDRIAETTPGKKVMMTVIRQG 343

Query: 379 QQLKL 383
           +Q +L
Sbjct: 344 KQQEL 348