Pairwise Alignments

Query, 402 a.a., quality control serine endoprotease DegS from Pseudomonas putida KT2440

Subject, 450 a.a., serine protease, HtrA/DegQ/DegS family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  253 bits (647), Expect = 6e-72
 Identities = 136/289 (47%), Positives = 191/289 (66%), Gaps = 4/289 (1%)

Query: 104 FRRFFGDNLPKQRRWES---SLGSAVIMSPE-GYLLTNNHVTSGADQIVVALKDGRETLA 159
           FR FFG N P+++  E     LGS VI+  + GY++TNNHV  GAD I V L DGRE  A
Sbjct: 70  FRYFFGPNAPQEQVQERPFRGLGSGVIIDADKGYIVTNNHVIDGADDIQVGLHDGREVKA 129

Query: 160 RVIGSDPETDLAVLKIDLKNLPAITIGRSDTIHIGDVSLAIGNPFGVGQTVTMGIISATG 219
           ++IG+D E+D+A+L+I+ KNL AI    SD + +GD ++AIGNPFG+GQTVT GI+SA G
Sbjct: 130 KLIGTDSESDIALLQIEAKNLVAIKTSDSDELRVGDFAVAIGNPFGLGQTVTSGIVSALG 189

Query: 220 RNQLGLNNYEDFIQTDAAINPGNSGGALVDANGNLIGINTAIFSKSGGSQGIGFAIPVKL 279
           R+ LG+   E+FIQTDAAIN GNSGGALV+  G LIGINTAI + +GG+ GIGFAIP  +
Sbjct: 190 RSGLGIEMLENFIQTDAAINSGNSGGALVNLKGELIGINTAIVAPNGGNVGIGFAIPANM 249

Query: 280 ALEVMKSIVEHGQVIRGWLGIEVQPLSQELAESFGMKDRPGIVVAGIFREGPAAKAGLHL 339
              ++  I EHG+V RG LGI  + L  +LA+ FG+  + G  V  +     A KAG+  
Sbjct: 250 VKNLIAQIAEHGEVRRGVLGIAGRDLDSQLAQGFGLDTQHGGFVNEVSAGSAAEKAGIKA 309

Query: 340 GDVILSINGEPAGDGRKSMNQVARIKPNEKITIEVMRNGQQLKLIAEVG 388
           GD+I+S++G      ++   +VA +    K+ + ++R+G +  +   +G
Sbjct: 310 GDIIVSVDGRAIKSFQELRAKVATMGAGAKVELGLIRDGDKKTVNVTLG 358



 Score = 30.4 bits (67), Expect = 1e-04
 Identities = 17/65 (26%), Positives = 35/65 (53%), Gaps = 2/65 (3%)

Query: 320 GIVVAGIFREGPAAKAGLHLGDVILSINGEPAGDGRKSMNQVARIKPNEKITIEVMRNGQ 379
           G+ +  + +  PAA +GL  GD+I+ IN     D  KS+ ++ + +    + ++++R   
Sbjct: 386 GVEITDVAQGSPAAMSGLQKGDLIVGINRTAVKD-LKSLKELLKDQEG-AVALKIVRGKS 443

Query: 380 QLKLI 384
            L L+
Sbjct: 444 MLYLV 448