Pairwise Alignments

Query, 392 a.a., putative amino acid ABC transporter - permease subunit from Pseudomonas putida KT2440

Subject, 399 a.a., ABC transporter permease from Azospirillum brasilense Sp245

 Score =  414 bits (1063), Expect = e-120
 Identities = 218/389 (56%), Positives = 277/389 (71%), Gaps = 5/389 (1%)

Query: 7   APKGLS--LNDPRVRAWLFQILTIVFVVGLGWYLFHNTQTNLQHRGITSGFDFLDRSAGF 64
           AP G+S  L+DP VRA  +Q+L +  V+ +GW+L HNT  NL  R I +GF FLDR A F
Sbjct: 13  APGGVSFSLSDPTVRAVFYQVLVVGIVIAVGWFLIHNTLDNLSKRSIATGFGFLDREASF 72

Query: 65  GIAQHLIPYVESDSYARVFVIGLLNTLLVTFIGVILATILGFIIGVARLSPNWMINKLAT 124
           GI + LI Y   DSY R F++G+LNTL V+ IGV+LAT+LG +IGVARLS NW+I KLA+
Sbjct: 73  GIGESLIDYHPRDSYGRAFLVGVLNTLKVSIIGVVLATVLGTLIGVARLSSNWLIAKLAS 132

Query: 125 VYVETFRNIPPLLQILFWYFAVFLTLPGPRGSINIEDMFFISNRGLNMPGASIADGFWPF 184
            YVE  RNIPPLLQ+ FWY  V  ++P  R ++N     F+S RGL +P  S AD  W  
Sbjct: 133 TYVEIVRNIPPLLQLFFWYALVSESMPPVRQALNPIPGVFLSQRGLFVPVPS-ADPVWGT 191

Query: 185 V-VALALAIAAIALMVRYANKRFNETGVPFHKFWAGLLLFIAIPSLSVLLFGSPVTWDMP 243
           +  ALA+A+  +  + R+A  R   TG PF    A L L I +P ++ +  G+P   D+P
Sbjct: 192 MGFALAIAVIGVIFLRRWAKARQERTGQPFPIGTASLSLLIGLPLIAYIAGGAPTALDVP 251

Query: 244 QLKGFNFVGGWVLIPELLALTLALTIYTAAFIAEIVRSGIRSVSHGQTEAARSLGLREGP 303
           +L+GFNFVGG VL PE  A+ + L +YTAAFIAE+VRSGI +V+ GQTEAAR+LG+  G 
Sbjct: 252 KLQGFNFVGGVVLTPEFFAILVGLVVYTAAFIAEVVRSGILAVNWGQTEAARALGIDSGK 311

Query: 304 TLRKVIIPQALRVIIPPLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAIEVIA 363
           TLR V++PQALRVI+PPLTSQYLNL KNSSLA  IGYP++VS+ A T LNQTGQAIE +A
Sbjct: 312 TLRLVVLPQALRVIVPPLTSQYLNLTKNSSLALAIGYPDLVSI-ANTTLNQTGQAIEGVA 370

Query: 364 ITMSVYLAISISISLLMNWYNKRIALIER 392
           + M  YL IS+ IS+ MNWYNKRIAL+ER
Sbjct: 371 MIMGTYLVISLGISIFMNWYNKRIALVER 399