Pairwise Alignments

Query, 392 a.a., putative amino acid ABC transporter - permease subunit from Pseudomonas putida KT2440

Subject, 377 a.a., ABC-type permease for basic amino acids and glutamine from Synechococcus elongatus PCC 7942

 Score =  259 bits (661), Expect = 1e-73
 Identities = 158/374 (42%), Positives = 221/374 (59%), Gaps = 17/374 (4%)

Query: 15  DPRVRAWLFQILTIVFVVGLGW-YLFHNTQTNLQHRGITSGFDFLDRSAGFGIAQHLIPY 73
           D R+  W++Q+L ++ VVGLG  +L  N   NL  RG++  FD+LD+SAGF I +  I Y
Sbjct: 14  DERLWRWVWQLL-VLLVVGLGAIWLVDNLVYNLSQRGLSLSFDWLDQSAGFNIGESAIAY 72

Query: 74  VESDSYARVFVIGLLNTLLVTFIGVILATILGFIIGVARLSPNWMINKLATVYVETFRNI 133
             +DSYAR  V+GL+N+L V  IG+IL T++G + GVA  S NW++ +L+  YV   RN 
Sbjct: 73  RTADSYARALVVGLVNSLRVIAIGLILTTVIGTLAGVAAFSENWLLRQLSRGYVAVVRNT 132

Query: 134 PPLLQILFWYFAVFLTLPGPRGSINIEDMFFISNRGLNMPGASIADGFWPFVVALALAIA 193
           P LLQ++ WYF + L+LP  +   +     ++S +G+ +P        WP      + I 
Sbjct: 133 PLLLQLIVWYFPILLSLPAAQQPWHWLGSLYLSKQGIYLP--------WPQTPGWLVVIL 184

Query: 194 AIALMVRYANKRFNETGVPFHKFWAGLLLFIAIPSLSVLLFGSPVTWDMPQLKGFNFVGG 253
           AIAL V + +        P    W    L+ AI  ++VL+  + ++W   QL+     GG
Sbjct: 185 AIAL-VLFVSWLAQRQRSPRDWRW----LYGAIAVVTVLMLLTQLSWPQ-QLQPGQIRGG 238

Query: 254 WVLIPELLALTLALTIYTAAFIAEIVRSGIRSVSHGQTEAARSLGLREGPTLRKVIIPQA 313
             L  E  AL L L  YT AFI EI+R GI SV  GQ EAA +LGL    TL ++++PQA
Sbjct: 239 LRLSLEFTALLLGLVAYTGAFITEIIRGGILSVPAGQWEAAAALGLTRSQTLWQIVVPQA 298

Query: 314 LRVIIPPLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAIS 373
           LRVI+P L SQY+  AKNSSLA  +GYP++ +  A T LNQTG+ +EV  I M  YLAI+
Sbjct: 299 LRVIVPSLNSQYVGFAKNSSLAIAVGYPDLYAT-AQTTLNQTGRPVEVFLILMLTYLAIN 357

Query: 374 ISISLLMNWYNKRI 387
             IS  MN   +R+
Sbjct: 358 AVISAGMNGLQQRL 371