Pairwise Alignments

Query, 392 a.a., putative amino acid ABC transporter - permease subunit from Pseudomonas putida KT2440

Subject, 230 a.a., Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine (NCBI) from Rhodospirillum rubrum S1H

 Score = 85.9 bits (211), Expect = 1e-21
 Identities = 51/148 (34%), Positives = 84/148 (56%), Gaps = 8/148 (5%)

Query: 250 FVGGWVL-------IPELLALTLALTIYTAAFIAEIVRSGIRSVSHGQTEAARSLGLREG 302
           ++G W+L       +    +  L  T++ AA+ AEI+RSGI+SVS GQT AA++LGL   
Sbjct: 83  YLGQWILGTDRPMQVGTFTSSLLTFTLFEAAYFAEIMRSGIQSVSRGQTAAAQALGLTYF 142

Query: 303 PTLRKVIIPQALRVIIPPLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAIEVI 362
            ++  V++PQA R ++P L +Q + L +++SL   +   + +   A  V  + G+ +E+ 
Sbjct: 143 QSMGHVVLPQAFRAMLPVLLTQVIVLFQDTSLVYVLSITDFLGA-ASKVAQRDGRLVEMY 201

Query: 363 AITMSVYLAISISISLLMNWYNKRIALI 390
                VY AIS + SLL+     R A+I
Sbjct: 202 LFAAVVYFAISFAASLLVKRIQARTAII 229



 Score = 42.4 bits (98), Expect = 1e-08
 Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 17/95 (17%)

Query: 52  TSGFDFLDRSAGFGIAQHLIPYVESDSYARVFVIGLLNTLLVTFIGVILATILGFIIGVA 111
           T  FD + RS G+                 +F  G+  TL +T +G +   +LG  + + 
Sbjct: 4   TLDFDVIARSIGY-----------------LFYDGMTFTLGLTLLGTLAGGLLGTALAML 46

Query: 112 RLSPNWMINKLATVYVETFRNIPPLLQILFWYFAV 146
           RLS   ++  LAT+Y+   R++P +L I + YF V
Sbjct: 47  RLSSLPVLPHLATLYINLMRSMPLVLLIFWVYFMV 81