Pairwise Alignments

Query, 392 a.a., putative amino acid ABC transporter - permease subunit from Pseudomonas putida KT2440

Subject, 367 a.a., Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine (NCBI) from Rhodospirillum rubrum S1H

 Score = 84.7 bits (208), Expect = 4e-21
 Identities = 46/134 (34%), Positives = 83/134 (61%), Gaps = 2/134 (1%)

Query: 257 IPELLALTLALTIYTAAFIAEIVRSGIRSVSHGQTEAARSLGLREGPTLRKVIIPQALRV 316
           I +LL    A+ ++TA+++AEI+R+G++++  GQ EAARSLGL  G T+R V++PQALR+
Sbjct: 229 IDKLLRAQGAILLFTASYLAEIIRAGLQAIPPGQYEAARSLGLGYGLTMRLVVLPQALRL 288

Query: 317 IIPPLTSQYLNLAKNSSLAAGIGYPEMVSL--FAGTVLNQTGQAIEVIAITMSVYLAISI 374
           +IP + +  + + ++++L A IG  +++S    A T  +  G   E   +  ++Y A+  
Sbjct: 289 VIPSIVTLAIGILQDTTLVAVIGIHDLLSASKLAATDPDWLGFYTEGFCLVATLYFALCF 348

Query: 375 SISLLMNWYNKRIA 388
           + S    W  + +A
Sbjct: 349 AASRYSLWLERYLA 362



 Score = 30.4 bits (67), Expect = 9e-05
 Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)

Query: 227 PSLSVLLFGSP-VTWDMPQLKGFNFVGGWVLIPELLALTLA 266
           P+L+ LL G+  V   +P+L G N +  W+L+P L  L +A
Sbjct: 104 PALASLLLGALLVASGLPRLWGRNLLVAWILVPLLAVLVMA 144