Pairwise Alignments

Query, 392 a.a., putative amino acid ABC transporter - permease subunit from Pseudomonas putida KT2440

Subject, 233 a.a., amino acid ABC transproter, permease protein, His/Glu/Gln/Arg/opine family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  105 bits (261), Expect = 2e-27
 Identities = 58/126 (46%), Positives = 80/126 (63%), Gaps = 1/126 (0%)

Query: 259 ELLALTLALTIYTAAFIAEIVRSGIRSVSHGQTEAARSLGLREGPTLRKVIIPQALRVII 318
           E  A  ++LT+YTAAFIAE +RSGI S+   Q EA+R+ GL     +  V++PQA R+I+
Sbjct: 100 EFAAGVISLTVYTAAFIAEEIRSGIFSIPRTQLEASRACGLSFMQAMSYVVLPQAFRIIV 159

Query: 319 PPLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAISISISL 378
           PPL SQ LNL KNSSL   IG  E+ +  A  + + T    E   ++  +YL IS+ +SL
Sbjct: 160 PPLISQALNLFKNSSLCMTIGVMEL-TYMARQIESYTFHGFEAFTVSTLIYLCISLMVSL 218

Query: 379 LMNWYN 384
           L+N YN
Sbjct: 219 LINLYN 224



 Score = 49.3 bits (116), Expect = 1e-10
 Identities = 26/68 (38%), Positives = 38/68 (55%)

Query: 84  VIGLLNTLLVTFIGVILATILGFIIGVARLSPNWMINKLATVYVETFRNIPPLLQILFWY 143
           V G++ T  ++ + ++LA +LG +I V RLS        +  + E FRN P L+QI FWY
Sbjct: 20  VQGVITTCQLSGLSLVLAMLLGTLIAVMRLSGVRPFVWFSVAFTEFFRNTPLLVQIFFWY 79

Query: 144 FAVFLTLP 151
           F     LP
Sbjct: 80  FGSDAVLP 87