Pairwise Alignments

Query, 342 a.a., putative amino-acid ABC transporter-binding protein YhdW from Pseudomonas putida KT2440

Subject, 359 a.a., extracellular solute-binding protein, family 3 from Synechococcus elongatus PCC 7942

 Score =  311 bits (798), Expect = 1e-89
 Identities = 152/334 (45%), Positives = 222/334 (66%), Gaps = 4/334 (1%)

Query: 11  LTAAAALGAVSTAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDAQGKIVGIDADVCRAVA 70
           L A  +LG   T ++ + L+ V+ +G + CGV   LPGFS  D+QG   G+D D+C+A+A
Sbjct: 28  LAACRSLGGNET-ESNSRLNQVQARGKLLCGVEGRLPGFSFLDSQGNYSGLDVDICKAIA 86

Query: 71  AAVFGDATKVKFSQLNAKERFTALQSGEVDVLSRNTTWTSSRDA--GMGLVFAGVTYYDG 128
           AA+F D   +++  L++ ERF AL SGEVD+LSRNTTWT SRDA  G  L FA  T+YDG
Sbjct: 87  AALFNDPKAIEYRSLDSVERFPALASGEVDLLSRNTTWTLSRDAKGGNNLEFAPTTFYDG 146

Query: 129 VGFLVNKKLGVSSAKELDGATICIQAGTTTELNVSDFFRANGLKYTPITFDTSDESAKSL 188
            G +V +  G+ S ++  G +IC++ GTT+ELN++D  R  G++Y  I F  SD +  + 
Sbjct: 147 QGLMVRRNSGIQSLQDFQGKSICVETGTTSELNLADTMRELGVQYQEIKFPNSDANYAAY 206

Query: 189 ESGRCDVLTSDKSQLFAQRSKLAAPTEYVVLPETISKEPLGPVVRKGDEEWFSIVKWTLF 248
             GRC+ +TSD+SQL A+R+ L+   ++ +L   ISKEPL P     D  WF +VKW + 
Sbjct: 207 AQGRCEGVTSDRSQLAARRTTLSDADQHQLLDAVISKEPLSPATLNNDSPWFDVVKWVVN 266

Query: 249 AMLNAEEAGITSKNVEAEAKATKNPDVARLLGADGEYGKDLKLPKDWVVQIVKQVGNYGE 308
           A + AEE GIT  N++ + K +KNP++ R LG +GE G+ L L  D+  + +K VGNYGE
Sbjct: 267 ATIQAEEFGITQANID-QFKTSKNPEIRRFLGLEGELGQQLGLSNDFAYRAIKAVGNYGE 325

Query: 309 VFEKNLGQSTDLKIDRGMNALWNNGGIQYAPPVR 342
           ++E+N+GQ + LK++RG+N L+ NGG+ Y+PP R
Sbjct: 326 IYERNVGQQSPLKLNRGLNQLYKNGGLLYSPPFR 359