Pairwise Alignments

Query, 342 a.a., putative amino-acid ABC transporter-binding protein YhdW from Pseudomonas putida KT2440

Subject, 373 a.a., extracellular solute-binding protein, family 3 (NCBI) from Rhodospirillum rubrum S1H

 Score =  231 bits (589), Expect = 2e-65
 Identities = 126/334 (37%), Positives = 185/334 (55%), Gaps = 3/334 (0%)

Query: 11  LTAAAALGAVSTAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDAQGKIVGIDADVCRAVA 70
           L AA  L A + A  G TL +++ +G V CG +  +PGF  PD+ G   G   D CRA+A
Sbjct: 41  LVAALTLAAPALAANGDTLTSIRDRGSVTCGTNP-IPGFGFPDSDGNWRGFFIDFCRALA 99

Query: 71  AAVFGDATKVKFSQLNAKERFTALQSGEVDVLSRNTTWTSSRDAGMGLVFAGVTYYDGVG 130
           AA  GD T  +   + +  R+ AL S   DV    +TWT SRD  +G  F GV  YDG  
Sbjct: 100 AATLGDPTAFEVVPVESNSRWEALNSHTTDVNVDGSTWTLSRDTALGFDFPGVLIYDGQR 159

Query: 131 FLVNKKLGVSSAKELDGATICIQAGTTTELNVSDFFRANGLKYTPITFDTSDESAKSLES 190
           FL    +   S K   G  +CI  GTT E+N+ DF + N L+ T I  ++ + +  S   
Sbjct: 160 FLAKPSVPEGSVKAAAGLRVCIIMGTTAEVNLRDFLKKNDLEMTVIATESDEGAWTSFLK 219

Query: 191 GRCDVLTSDKSQLFAQRS-KLAAPTEYVVLPETISKEPLGPVVRKGDEEWFSIVKWTLFA 249
           GRC++  +D   L  + +  +  P    ++ E ISKEPLGPVVR  D +W  I +W L  
Sbjct: 220 GRCELFVNDGIGLALRNALHMTPPRVNHLMTEAISKEPLGPVVRGDDHQWLEINRWVLNV 279

Query: 250 MLNAEEAGITSKN-VEAEAKATKNPDVARLLGADGEYGKDLKLPKDWVVQIVKQVGNYGE 308
           ++ AEEAGI+S   V+    A  + +    +G   +    L L   W  +++  VGNYGE
Sbjct: 280 LIAAEEAGISSTTLVDPSPTADLSSEDRVFVGGPEDNAAALGLEPGWARRVIAAVGNYGE 339

Query: 309 VFEKNLGQSTDLKIDRGMNALWNNGGIQYAPPVR 342
           VF++NLG+ +++ +DRG+NALW+ GG+  +PP++
Sbjct: 340 VFDRNLGKGSEIGLDRGVNALWSEGGLMISPPLQ 373