Pairwise Alignments

Query, 342 a.a., putative amino-acid ABC transporter-binding protein YhdW from Pseudomonas putida KT2440

Subject, 299 a.a., periplasmic component of amino acid ABC-type transporter/signal transduction system from Dechlorosoma suillum PS

 Score = 85.9 bits (211), Expect = 1e-21
 Identities = 68/259 (26%), Positives = 110/259 (42%), Gaps = 6/259 (2%)

Query: 2   KMLKTTLAVLTAAAALGAVSTAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDAQGKIVGI 61
           K L    A +  +A   A   AQ   TL  +K  G +  G  +    FS  D + +++G 
Sbjct: 3   KTLTLAAAAVIGSALCAAPVLAQESPTLKKIKDTGSITLGHRESSIPFSYYDDKQQVIGY 62

Query: 62  DADVCRAVAAAVFGDAT----KVKFSQLNAKERFTALQSGEVDVLSRNTTWTSSRDAGMG 117
             ++      A+  +       VK   + +  R T LQ+G VD+   +TT    R   +G
Sbjct: 63  SHEMMLKAVDAIKAELKLAKLDVKLMPVTSANRITLLQNGTVDMECGSTTNNLERQKQVG 122

Query: 118 LVFAGVTYYDGVGFLVNKKLGVSSAKELDGATICIQAGTTTELNVSDFFRANGLKYTPIT 177
             F+   +  G   +  K  GV    +L G  +   AGTT+E  +        +K   I+
Sbjct: 123 --FSTSIFVIGTRLMAKKDAGVKDFPDLAGKNVVTTAGTTSERLIRKMNEEKQMKMNIIS 180

Query: 178 FDTSDESAKSLESGRCDVLTSDKSQLFAQRSKLAAPTEYVVLPETISKEPLGPVVRKGDE 237
                ES  +LESGR      D + L+ + +K   P ++VV+    SKE  G ++RK D 
Sbjct: 181 AKDHGESFLTLESGRAVAFMMDDALLYGEMAKAKRPGDWVVVGTAQSKEAYGCMLRKDDA 240

Query: 238 EWFSIVKWTLFAMLNAEEA 256
            +  +V   L   + + EA
Sbjct: 241 GFKKVVDAALTKAMTSGEA 259