Pairwise Alignments

Query, 480 a.a., ATP-dependent RNA helicase RhlB from Pseudomonas putida KT2440

Subject, 451 a.a., ATP-dependent RNA helicase RhlE from Vibrio cholerae E7946 ATCC 55056

 Score =  266 bits (680), Expect = 1e-75
 Identities = 150/365 (41%), Positives = 210/365 (57%), Gaps = 6/365 (1%)

Query: 93  FHDFKLSNELMHAIHDLGFPYCTPIQAQVLGYTLRGQDAIGRAQTGTGKTAAFLISIISQ 152
           F    LS  ++ AI + G+   +PIQ Q +   L G+D +  AQTGTGKTA F + I+  
Sbjct: 3   FTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPILEL 62

Query: 153 LQQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAALTKYTGLNVMSFVGGMDFDKQLKA 212
           L + P  +   +   RALI+ PTREL  QI  +     ++  L      GG+  + Q++ 
Sbjct: 63  LAKGPKVRANQV---RALILTPTRELAAQIQDNVMLYGRHLPLKSAVVFGGVKINPQMQR 119

Query: 213 LEARHCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPPK 272
           +  +  DILVATPGRL+D   +  V  D +E++VLDEADRMLDMGFI  + +I++  P K
Sbjct: 120 M-CKGADILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEK 178

Query: 273 SERQTLLFSATFTDDVMNLAKQWTTNPAIVEIEPENVASETVEQHVYAVAGSDKYKLLYN 332
             RQ LLFSATF+ ++  LAK    NP  + + P N  + TVEQ +Y      K  +L  
Sbjct: 179 --RQNLLFSATFSTEIRELAKGLVNNPVEISVSPANSTARTVEQCIYPADVKKKPDMLVK 236

Query: 333 LVTQNKWERVMVFANRKDEVRRIEEKLVRDGINAAQLSGDVPQHKRIRTLESFREGRITV 392
           LV +  W++V+VF   K    R+   L   G+ AA + G+  Q  R R L  F+ G + +
Sbjct: 237 LVKEGNWQQVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRI 296

Query: 393 LVATDVAGRGIHIDGISHVINFTLPEDPDDYVHRIGRTGRAGTSGVSISFAGEDDSYQLP 452
           LVATD+A RGI I  +  V+NF LP+  +DYVHRIGRTGRAG  G +IS     ++ +L 
Sbjct: 297 LVATDIAARGIDIPQLPQVVNFELPKIAEDYVHRIGRTGRAGEVGKAISLVSAIEAPELF 356

Query: 453 AIEAL 457
           AIE L
Sbjct: 357 AIERL 361