Pairwise Alignments

Query, 480 a.a., ATP-dependent RNA helicase RhlB from Pseudomonas putida KT2440

Subject, 499 a.a., ATP-dependent RNA helicase from Sinorhizobium meliloti 1021

 Score =  271 bits (693), Expect = 4e-77
 Identities = 153/376 (40%), Positives = 228/376 (60%), Gaps = 10/376 (2%)

Query: 91  TRFHDFKLSNELMHAIHDLGFPYCTPIQAQVLGYTLRGQDAIGRAQTGTGKTAAFLISII 150
           T F D  LS +++ A+ D G+   TPIQ   +   L+ +D +G AQTGTGKTA+F++ ++
Sbjct: 2   TNFADLGLSQKVLSAVTDAGYTIPTPIQVGAIPPALQRRDILGIAQTGTGKTASFVLPML 61

Query: 151 SQLQQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAALTKYTGLNVMSFVGGMDFDKQL 210
           + L++           PR LI+ PTREL  Q+A++     K   LN+   +GG+ FD+Q 
Sbjct: 62  TLLEKGRARARM----PRTLILEPTRELAAQVAENFDKYGKNHKLNIALLIGGVSFDEQD 117

Query: 211 KALEARHCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTP 270
           + LE R  D+L+ TPGRLLD  +RG++ +  VE++V+DEADRMLDMGFIP + +I +  P
Sbjct: 118 RKLE-RGADVLICTPGRLLDHCERGKLLMTGVEILVIDEADRMLDMGFIPDIERIAKLIP 176

Query: 271 PKSERQTLLFSATFTDDVMNLAKQWTTNPAIVEIEPENVASETVEQHVYAVAGSD--KYK 328
               RQTL FSAT   ++  LA ++  NP  +E+   +  + TV Q   A  G D  K  
Sbjct: 177 --FTRQTLFFSATMPPEIQKLADRFLQNPERLEVARRSSTAITVTQRFVAAHGKDYEKRA 234

Query: 329 LLYNLV-TQNKWERVMVFANRKDEVRRIEEKLVRDGINAAQLSGDVPQHKRIRTLESFRE 387
           +L  L+ +Q   +  ++F NRK +V  +   L R G +   L GD+ Q  R+  L +F++
Sbjct: 235 VLRELIRSQEDLKNAIIFCNRKKDVAELFRSLDRHGFSVGALHGDMDQRSRMAMLANFKD 294

Query: 388 GRITVLVATDVAGRGIHIDGISHVINFTLPEDPDDYVHRIGRTGRAGTSGVSISFAGEDD 447
           G I +LVA+DVA RG+ I  +SHV NF +P   +DYVHRIGRTGRAG SG + +   + +
Sbjct: 295 GNIKLLVASDVAARGLDIPDVSHVFNFDVPIHAEDYVHRIGRTGRAGRSGAAFTIVTKRE 354

Query: 448 SYQLPAIEALLGRKIK 463
           +    AIE L+G+K++
Sbjct: 355 TKFSDAIEKLIGQKVE 370